Naga_100055g28, gene5821 (gene) Nannochloropsis gaditana

Overview
NameNaga_100055g28
Unique Namegene5821
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:396221..399946 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100055g28
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:396221..399946 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0009056catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01540NO14G01540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6026rna6026-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna6025rna6025-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6026rna6026Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna6025rna6025Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6026

>rna6026-protein ID=rna6026-protein|Name=rna6026|organism=Nannochloropsis gaditana|type=polypeptide|length=672bp
MQVNSIQVAEWAQTFIVTFLCLLSGRGKSWSDPWVTQSPTTVGPGPFTNT
VADLQMVCRGDAPNVTLLALHESVVRALITEGLYRHIRVISGASGGSIIA
GMAAIHNEKELMDRVLVKEVSTDFKHNGEMRQKKIVWFPPLFEQAKHFIK
NGILIDNKEFQRTCEFYYGSFTFQEAFERTHKHVCISVAASTLGASSQGG
PRRLLLNHITTPNVLIRSAVAASCALPGIMAPNYLQCKDDRGHVVPFDMD
GVQYVDGSLQADLPFRRISTLFAVSHFIVSQVNFHVVPFLRKMHSPAESS
LYWKLFRFFDTDIRHRVTSLAELGLLPRVFGQDLSGIFRQRYSGHVTLTP
RFRMSEMIGLKAFQNPTEAEMRHYILNGKRSVWPHLHHIKHNTLVERVLS
DSLSKLRRQSYYLALGQPHADNSPASLSLQCAVPSGGGSNVTGVNPLSGM
ATCGTCSPRVDTNFASMLPPLPPTSNAISRCSTPRRYRDEGILSTPLLVT
AGATLRRSDSGRFEDDDSDMLEPSGTPSSSACAATDTPANGGGTGSTENQ
RFVRSPGRQHFRIQQLQAENRALRERVRLLQQSMEALKKAESGLYDHENL
ATRQESIKAGNHSNRSSLQSGLSYSVASSGSYSDQRDCETPKAALHISDT
VGFEETGPEGPPVVVKSIPLVE
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protein sequence of rna6025

>rna6025-protein ID=rna6025-protein|Name=rna6025|organism=Nannochloropsis gaditana|type=polypeptide|length=869bp
MSLWLTPPMGLSEWLVGAKECAANAARSWQDGLYKQYLPESHWMALIVIL
AVLLLPLILNIWGWMLWILLSIFLGLSRTVYSIFTVLHVLMDVWALSVMK
TCYTIYRFLAAFLLPPAAASTRQRLLTARNVTQYQTLAEQVDAEDGMLSW
RADDSDLPQSVTIKSTIAKLEESLQAKDTSKLQFILLNGLLKRNHLGIDE
RDLHIRALSGSKLLVERYDKKVVECIKYITECQELTREEKVMFVKKARRA
LGQTALMLSGGGSISMYHAGVVRALITEGLYRHIRVISGASGGSIIAGMA
AIHNEKELMDRVLVKEVSTDFKHNGEMRQKKIVWFPPLFEQAKHFIKNGI
LIDNKEFQRTCEFYYGSFTFQEAFERTHKHVCISVAASTLGASSQGGPRR
LLLNHITTPNVLIRSAVAASCALPGIMAPNYLQCKDDRGHVVPFDMDGVQ
YVDGSLQADLPFRRISTLFAVSHFIVSQVNFHVVPFLRKMHSPAESSLYW
KLFRFFDTDIRHRVTSLAELGLLPRVFGQDLSGIFRQRYSGHVTLTPRFR
MSEMIGLKAFQNPTEAEMRHYILNGKRSVWPHLHHIKHNTLVERVLSDSL
SKLRRQSYYLALGQPHADNSPASLSLQCAVPSGGGSNVTGVNPLSGMATC
GTCSPRVDTNFASMLPPLPPTSNAISRCSTPRRYRDEGILSTPLLVTAGA
TLRRSDSGRFEDDDSDMLEPSGTPSSSACAATDTPANGGGTGSTENQRFV
RSPGRQHFRIQQLQAENRALRERVRLLQQSMEALKKAESGLYDHENLATR
QESIKAGNHSNRSSLQSGLSYSVASSGSYSDQRDCETPKAALHISDTVGF
EETGPEGPPVVVKSIPLVE
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Synonyms
Publications