Naga_100123g9, gene5806 (gene) Nannochloropsis gaditana

Overview
NameNaga_100123g9
Unique Namegene5806
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:349835..354286 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100123g9
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:349835..354286 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01330NO14G01330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6010rna6010-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6010rna6010Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6010

>rna6010-protein ID=rna6010-protein|Name=rna6010|organism=Nannochloropsis gaditana|type=polypeptide|length=1351bp
MTETSDSWEDDGWGACAANKIDEDDEEDTAEGLGQVEPSIRGTALIDLNA
KGRIFSKVWNADHSENGLRVMFLGGKLINCTVDRHKLAGNKVMRFVTKIA
SNAPTKGREKRQMIIAISTESVAEKVATGRDDDLVEIGRTDKSYDDPDSI
FAIPVRVACRKDMSCTVRVQVTCAQSNLGVGGEAALLGQYIAKFSDIWNA
TSGGTPLVFPMTSPACPRGSRAILWRLPFSSLCPPCSPFIELKARRHLSY
SVPYLFWRPERGECPGVGAQKARYHLRPHAREYAESDLEGPEFVNLVMAR
ETTLESRFPYLLATLICRPFLERMERAVEGWRLRLEHERIRQGFFSSHAE
ALKSGQMLVRLTVVAAEDLPLSSEGSPETDYGGLKVQPLKGDGVRLPNMS
QRTQKLVALRGNKRTQAEDSPVRCHPFVAVTLEKPPPQVGLLIGHTNTEY
ATRHPAFGTNTNKRLCPHNGRPRESFSPHGAARIQPPPPSSASVQAPAFL
FYTHADDPERGALRLEVFQESDRSPSCASFTASTRLSLESNFRRADKALP
IEEDAEVRLLLSDKAGRPAGRLLVRMAIFAAGGTNTMAAATSKSTGTQKA
LGVFESPLKPRTGETSGFSAQISPLEAAEEACYSWMWHAGFSGLAPRKGD
FLTQFAEQKAASAGGTSVVRLRYPVDWIEGHIASLTQDLSVLQDSLLLWQ
RAVDDGRGFRSSEHKMTKDLQGVPTNVHSQTFVVADLNPQTHGSSSSSAV
GCVPFSTSPSLSRDPALQDLFPSLSTHDVPHTAPAPQAVPPTRFYYDVVS
AGAPTAHALGYRRGGLLSHHLEMDILQKDIDALDQSLKPFYPSLQPTGET
GLLCDELLLKLLRFEALAAKTAMRRILVLSQALGIATTSIATKLDIMLAE
DADLTLSARTAENMCRAGFLICFQGLISTIGKEHGMLEDVAMAVEMASTF
SFEICPKPRCSLPPTGARPQPPGPTNASPPPRPSPHENQDVLIDLDIPSF
PSSPTLACTAYPSVSRTPMEDLPQSPKSFRDGGTTASQSGRTPPAAMDVE
FDHSRRHIRLLLHKDAYERLPSCLGRVGREQTNQSGQQHHQSGVVVPIVA
TLFTQGIDAKQSLANLSNQLKKEAKEDTTAEQGGARIKNTSSKAASAKVG
GDSTIQPLINRRSARILNDYCHRCHPVLPPGKYNLFDRLTERIDVGRSSL
VFDPAEDFARSLSDISVHPLCEGLMEALTRENGMHKNVDLLREQERMVLE
VGGGQVIFCKSGKDRTGMAITLFQARLLARHGCEGLGTDGLIRNANIMRI
HGTRLLICDKNVGRLKFAFNGLQLQFMPLLYKPPLETVEHLIVSIINRDI
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Synonyms
Publications