Naga_100123g10, gene5805 (gene) Nannochloropsis gaditana

Overview
NameNaga_100123g10
Unique Namegene5805
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:342763..349740 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100123g10
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:342763..349740 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01320NO14G01320Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6009rna6009-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6009rna6009Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6009

>rna6009-protein ID=rna6009-protein|Name=rna6009|organism=Nannochloropsis gaditana|type=polypeptide|length=1921bp
MSLAYFRESSSRVVRTLLKDEVLKQCLEGRYWEESARENVFSASFQVDDP
RFVPDEDRCSLQPQQKVDVDMLARYYPYSAYAERRPKYADRYSMAADLAP
EERGTGGGEPLVDVRWMARRLPNARYQRLYFFPAERRTAANKAELEMCGK
QWRERVHVTLFIKKWDFAVSNNKLNVQGDFGDLLKNPRRCISTEPRDLPA
KFLEWVQHCHKKYDRENVMEAPYAPGQLPPEASKRPGVLYFQRVRFGSNE
NSTWRKDEVVWIPVGENSPRSSATRAGRGGAKRGRGRNGRSPSLALTRGG
TAAALEGYVVRISHFEVDEGDDLHMATTARAYYTRLPPDVFGAACAGWES
VSSLDPRACKLQAEEVAALEKEVRSRLAHGIDVYSWDGSNPESKQKMPQS
VEWVAGDSEGALQYGNLLVMVRDQRGLALSEHIAIIKGMYSARLKMTRKG
EGGSHAVEVVARTESKTIDVDGPCYAFQLPRPLSSGRYLLDFSVSGSLPS
CASVEADAFHVLITEEPPGEPTEAELTGLRPGSRSVCLSFSEEMPLPAFS
VVFKDPRQRPTWASQVILSLCLKNENFGLEYRGKAGVLAQGRASPGAVSS
SSPSTDDAVATIQKDTRNTEAMARNSSASVTVHFTMEAGAVEKGLCFEAG
DWVLIPDLGRSPLLGAEFPDTLTEAITLTVIEAGEKMVDQRFERELVIEP
GLPVSLQLVEPVLAGNARETTPETAIKVASDAQALPALRFKVLDLGGNVT
APDRGQRWTAVVEMEEEGVRLIEPSSRRGDSGWKISPSGELLLDRVSLEV
DFRPQDKGKRLVVLEVIGMAGDETFVASPVHVLVEAQRDVPRRAWLELRG
EGLVKGPVMDSSIVQAGEEEEVQDEDDKEGGNVASRGDAVVHVKPERRTK
MSMPAGESTLSPRVVVADILGEAIDSAKVHLRLLATCSSWARSETVQDSG
ELPGIPGPTDKVVKLQVQVFHAKQNDVGACSATRPAYIFEAEIHPLPGKP
DHVSFSRDLASDVRCGEAFNRQTSSIQCRDRFKNFVHITPSRGLPCPTVQ
WLSNDRNSPLKQEPQGCLRTVLGEDGAFHLPATVTLCGKAKDIKLRVVAP
GFTPMKSVLKLLPGAVCTLKLMAPQHGVKELAEQPSISLCRGEKLESLAV
AFFDQGGNRVNPPSEAILNLFWANAVPSEHASRRLSRSSTLHLKPEHMIS
SVRISREHQTGDPDNFIDPQPLALPTLVYDECRERTLRVELKAPSESRTG
GKVICAGDMFIKSYRVNRVVRLRVVTGEATPLALSESEKGSDPSTSPTIS
KQLLMLKLKEQWDVNTGPPALGIFLETEDGEAAQKLNFSADSGAFKVQVV
RPGTARVQRLGWYRDIRVEEGVLERQNGKRLFVLRNSPGVSMDEPGAFQI
KVTYVEQRKHIKAVTPDKDWKLEESVRISVRHNRAVSLRPENGTLEAMAL
SASNNRDNALARVVLERACIYPVDNRGKSTWHGAAMTVSLVQAPPRPPDS
PQDGVGPSLSGGHIITQPEQDAQTGLTKYVVPEISLESDVGTRSGKYRLK
FDVPGLKPYFKTVNFTTDVERQQKVQRLNQELNPLLQEMLAWKHKIKKTE
EKLHKLNKRIHEEFQYLQEQAGLFPETVKKAMPTSQQLEEAKVRLENDLR
ALRSQEITPLRRREGHLVPAVLSQGFKEVVAVGLVADRRLAEMLSWYATP
RNMKAVICQTNADYKRIRLLQSDVTVYSLQDTEEYWSKSRTKEQILKDKC
LPLQPVDPKFNFRCHAVNAIILRDEDEHLRMSVFWSMFSNTIILETEDDA
LAYREYCKRRGIRRPTILCYTDGRRLRGSGPLDGSDCFRPSDAQRLEFVF
GGQDPLETDAFKKQVIAVEKVEQLLQLLTEKNMYQDMIQEGRQDNRVQKL
QDRVVDLENELEKFVGNLAGH
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Synonyms
Publications