Naga_100086g24, gene5546 (gene) Nannochloropsis gaditana

Overview
NameNaga_100086g24
Unique Namegene5546
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:722681..735837 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100086g24
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:722681..735837 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0009058biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL020ngnoL020Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02690NO11G02690Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5741rna5741-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5741rna5741Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5741

>rna5741-protein ID=rna5741-protein|Name=rna5741|organism=Nannochloropsis gaditana|type=polypeptide|length=3854bp
MSTLPSNGNGSTAPAEGRWTKGRGWDGIGPWCDDATAEEICRAADKLSAE
DKTLTVAKAIRFLLPFCGDKRALTYLDGKGAEIEVQTFSDVMDCAMRIAA
YLQREMGLKPGDRAVLLYPPGQEFILAFLGCIVAGVVAVPVYPPHPYRME
TDLPRLNLIVKNSGCKVALTDSQYMLVIRGIAVKNMLSRVGLAKGATWPS
LRNVQTDKIRRSYAHTELLIEPDPQPDDLAFLQYTSGSTSLPKGVMVTHS
NLIAQIRLISLRSVEIFGYTNQLNVVSWLPQYHDMGLIGIFLTCLSTGTH
LIYMTPISFLQDPTMWLYTLHRYRAAITCAPNFAFALAQRKTSEALRDSM
DLSCIQCVICGAEPIRVEVMTSFFAFFAKSGFNPYALMPAYGLAEFTLCA
TSQPSGKPLNVLYVNQQVLGATGKIELVPTETPGAACYVGVGGPYSKDGT
QCRIVNPDTGECQGQGRIGEIWLDGPSKTRGYFDDEEKTKAAFRGMIKGE
EHLGHVYLQTGDQGFLWKDELFITGRIKDLIIVRGRNLYPQDIEYAVEAA
LESTLRPGCSGSFSLDCNGEETVAYVAELRSHTTDHELLQSTVDQIRRHI
AEEFQVAVSVVVLVEPRSIPKTTSGKIQRHKCKMGYREGTLKACFIWEAS
DGANGLAVPPPPKLGVLALSLNDDDDMSDDSFVSATLGGAELGDDFSSPE
TNYQRSPFKRKVSASFNSPYSSLSGMAPIKLPPVGEVPAATGSPAEDHGK
VTRNGQDETVQVVGGESWEVPSPVAVPPGSYVGNGEAEEEGGISKEHQAF
IDKMIDYVSKAREMQRESIDIDQPMSLLGFDSAGFVAMGRVMGDWVGKEI
SPAIVYKYTTIREIAGFLSRGADDSELSSGDLDEAIEADLDAAIAIVGIG
LKAPGGPTGNLVGKEAFWKFMMAGADAVREDMPIERKTEEGLMLPGGYMD
NVDAFDANFFGMSPAEAAHLDYHQGHALEVTWHALEDAGIEPSSLSGRTV
GVYIGAISHEFAVLESLRGESSTWAATGISNSLVANRVSYLLNVRGPSLT
LDTACSSSLVTVNDAVRDLRMGVVGMALAGGVNLILSSSASTALKKAGFL
STACRTFDAMGDGYCRGEGCGMVVLKRLSRAIADGDRVYSVIRGVAVNHD
GKTTSLTAPNPLAQEAVLRAAYRDAHIRPSQVRYIEAHGTGTKLGDSIEM
AALGAVMQSDRDREDGSKFRCIVASGKSNIGHLEAAAGIMGLIRCALVLY
NGQVPKAVHFEQPNPLIPWERLPFIIPRANMPLQEEGVADDPGATVVAGV
SGFGFGGTNAHAVLESVPKNFDFDDSFDTAVTASSTAKQPLPLLLPVSAR
SKEALTKLVGQYIDLLMGSGKNGSGKVMSYDRAVQVCLEASTRRTHHHGF
RVGATGRSAEELVASLKDSLDEGDIVPVSQTAQSPEVVFLFTGQGAGYKG
MGRQLYERNAVFRASMDEVDALLTPHLEFSVLKTVILTKDDYAVGGLTTL
QSQPTLFAIEYSMARVWAMLGVQPNVVMGHSVGEIVASVFAGIISLPDAA
KLICVRAKAMHSVPAGRGGMSVVFVGEDAAQELCESYKLEIAAVNGDTCV
TIAGAFSGLDAMQEHLKSKDIRFKRLDVGRAFHTSHMESALPAMLRIAEE
IQVRAPKAAPKLISLLSGAAMIEAPGADHWANHVRKPVLFLQGMRSLIQD
GRPRVFIEVGPDAALTAMTKRIISTRDKNVALIPSMTQARREDENLRLAE
AFGRAYVSGVALNFKALKVGPPVPCSVELPLYPFDETVHVALGQLTSKAM
ATIGDKPTMAMQQVLSATEAQRMDHGKTNLFEESWLLRKEHRGLRGRNLP
PAHTIYICSEPTDAAALASVKTLRERSHTVLVPQDAESAAKAALGEDHFN
KANVAGVDLLAGGDELKACLSGPNEADSVAVVYIAGGESGGQAPGLEDLG
RLTDTAFGETAQVLCVLRSIADLGQGTRIKLWIVTVRAKAVAPGDRIQSM
SATLWALGKSAMQESFPSLWACMIDLPGPGKDQLALLPSSTGNSAADFKV
AVPAAARLLQILDIETSSYSRTDPPEQLAFRRGQWLTMKLREAELQHDID
PAVLKKVEEATRANVFPPPGVEVQTRKTLTPDAWYLITGGLGGLGLNAAN
ALVRHGATKLILTSRGGKATAQYKPDLDALSAIPGVTVRPYACDTGDRAA
VFKMFQEFEADGGIRGVVHCAGILADGNIRNQDVDKLGAVWGGKVDGAVN
LHMASIRMSRPLDLWLTYSSSSALMGSPGQSNYSAANTALDCIAKLRRQV
GLVGTSFQWGVWVGVGFAEPSFLEQLDSVGFPSITKSLGSLVLSTLLNRN
ALAMPKVVCCHPVKWSVFVQRGPEYMMSGDLECFEAVQNRIPPKKEPVPL
TDDMKAYGALETASERTEMVENVLISSLKKATGKEITKTQNLGECGIASL
EAVELIETLVRRFPVNIALGKLLEYPTVETLSRYVGGQLDRIVDSKRSMP
LSRGQEILLAQGLSRSYIYQEMTFHGPLAPHALLEAWKQLLGRHPVLRTI
LDLKPEEGIGRQQTLPLEDTPFQEMYGLVVTASKAKDTNSLESMLGLAAD
TMNNIPGARLLSVKFATKISSNSTDSTVILAVPRMLLDNWSLRLLGSELT
GLYVMSQAVSSAAPGAAGPTLSPPLTSYQEAMKLAAQKESMTPGTVSPGV
RSLVRSGSSIASEKARILVPMTITGLSESNKPKDDSQSVRFTLTPALAAE
LSAHTIKSRIPPSTIFLSAYLISLWERSENTDASVLVDLDQRVARGDVVG
PVLVPFNVTLQRAHASRGPGELAYHVRESVDEALQLLQAPSTRTTEGALR
AIPEGVPGFAFHEIPLGGGEVGMIGDEKIQGLQLSVVSSLANDRKNTEYA
LNVATGPGYTMTDLGGFMDRLAFNIREVLLPMASRKKKDTPYTIPVAQAG
AVGAAGALTAKHVSLSIDQGSAAAASGDEAHVHGTPLPVLLIALLQIVGI
AIMGTVLAVPILLVWPLVAMALSDLGQAATLALVPLFYHLIGLIIAAEVL
VLRELLTRGRLTAGSYTVNSLPFLRWWFMSRLLSLTNPVYVDHMKNTIMY
IWWLRALGANVGEKVRFHAGVVLTDPDLITLGDDVVLGKGARLVSSIVRD
GVLIRGDVRVGNRGHVSTQAVMMPGSRLGQDSLLDRLSVAVEGQQLAENS
VYESSPSRFRRPRDDVDTAAHQLDSPVTISLDAFSFILQALLAPILATLA
AAIAYQPTAALAVTLKLFPFFDWSNWPEGPVIFALFSTVGVVPMTAFPTL
FASMASLRATAALLPDSVLLYTARQAGFPGATAEGIRNLFKTQEGVDTIK
GGLPAGMTLEGTPGTDSLVFVTSGKVAVKQVMLDAFGVPAATLYGIFGIV
WIFALGFLIQGFVLTLLTNLVYYILLAPPVSSNAYRVRGFKAHLRQVKIS
VLRWTYDRFMRLFVGTDFLPTWYWTLGAQIGRNVVIANTDVFEDPHLISL
GTQSTVTDYAALETTNEPGNGYVVCGRVKIGRDCVVAVRAVVAPGTELAD
GAIVMPQSVVSGGKVAADAVMMGVPAIKILDRSSLPGNAPADDSQGPVTL
GGCLKWGLGSCVYEWLVMRSIQGLVVPLVSCVINLLLVLASAYPPLLFYL
WAMAETGAKGAGWSVRLAQVATPIAFLSFWICILVVVVLHKWVLRGRQTE
GTIVPLRGPSYHARLQTLVLQNYAGVAALETLRGSVFAPWYLRLLGSRTD
GSAYINTLTITEPDLLTVGKQTVLDQDAVIMPNALEGRALVLGPVQVEDH
ARLGAASLILRNCSVKRGAELAETAVLPPTLSIRVKGVRYGAFVLEDATD
EESA
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Synonyms
Publications