Naga_100148g9, gene5535 (gene) Nannochloropsis gaditana

Overview
NameNaga_100148g9
Unique Namegene5535
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:699261..704397 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100148g9
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:699261..704397 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL020ngnoL020Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02780NO11G02780Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5730rna5730-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5730rna5730Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5730

>rna5730-protein ID=rna5730-protein|Name=rna5730|organism=Nannochloropsis gaditana|type=polypeptide|length=1680bp
MHSTVNPGSKQGCRMSRRSSDEEVIDVSRSQFVGSKNGERNPQLLVVAPG
PVNDAVVTQGAHSPPDRVGVHRRLPLQETRTNSIRLHDSSIQNLRSDVWA
AFCRPFEVNGVAVASKTHTRLLQMPVTSSSRGDTIQVTKCSEPQESLKPK
DCGDIHEEGAFRRESAVSDPLRKDSLRTDTTASKSSVQHVPSGSRRNIPN
CITTSVKSSPPLCWHCKHTMEDRGVCSIPRYRCQFFPRCPGRCGTDRPQE
AVFLQLRGPSLKDLCLSYPDMPATAVAFGANWLSARLKLCGLKDAVLDKA
RGIRPVPPGQRGGGGAWEVVLDVRECENVTRLLREHPTLDLVREVPLPTL
RFVSRLLDGEAAREEGGSGFFATPGEVERRFALLPRRVMKALFDFQKEGV
RFALRRQGRCFIGDEMGTGKTLQALAVMVCYQTEWPLLIVVPASLRLLWA
EVVEKWVPFLRPADIHVIFREADRVSSRSECPPVVITSYEMLRNLEASMT
AVAFHCVIFDESQKMATTRAHSALNRVTSAALRVASSAIRVLLLSGTPTM
ARPFEIYDQVRLLQADLLSTPQGSHDGASKWEFGRNYCTGVYWQTRSQRP
PLAAAKYDGTRCDEELYWLLRNAVLIRRLKKDVMAELPSLVRTVVRVEEG
KDGASIWSQQVDSTETEGRIECSFEGGASLKKIRAAYDQNCAAETCLMER
MEDEQTELQITWGDSEHRDERKRFVGQSEYHQLGHLKLGGVKEWLADRLL
GGWLDAGVVGYEEDAIVEADAPKFVIFAHHLDVLAVLHGFLHNIFVRHRA
CRRLAFHWSQVQIQGSTPPETRQDLVKRFKNDRYCRMALIGITAGGSGLD
LAAASTAVFVELPNSPHWLRQAEDRLHRRGQRRRVQIYYLVLPPGSAEDK
VWQCMRRLLRENTAVINSREEAEELDVNRVEEFRAQASLPQDAPSQAAEL
LEGGLFPLLSKGEERENFWPGNGLSESPPEFVREASEPEGGKEHLRGESE
RQADRVHDPSFPDTCLLSETNAHSANISSPSSKPAVASVRKACNAVEDAA
QTNGVNRTQEMSPPAVLASGVPVINHFLHGRFGGEDYEWELEALAGLTQE
DADEEQTVQAADGEGQVLQQRSDGLPNDIKVNADFSSYERCSAKTGTTTE
GNHTGNVAEDTVRCSYECADSPVHLSPSSQWCHPSPDKNTRTDKDITRAT
CALKGNVGCGQKPAVKLLYNLWFEVSKHTGWVHLHEHEDGSKPLGVHVDP
LDYYHLTGLAQNALSSLPLLEEIRARAADEIILEDLPPFIQVAPGEKWQL
LKFMTQFQKECARIRNQLYGYVLQPMEGGLQGWIRKHRTNRQRAGRQKAS
LPPRVLSSWDPDFGYRRHLTYEELFDPSRHSNVTRHVLVTSGRLFRRSFR
QPLDPQTHDPLCFCCGTAFSLPGGTRTLQDLLCSAACLAYFACLSRGGLR
REVGRRDRGICEMCGLDTLGLLERVKHSSCLKSREMLVVEEVPKFKERPK
LLARLVREPKEGHVWQADHIHMVAEGGGLCDTTNGRALCVLCHASVTAEQ
SRLGRGDKRRAGREKVKKERGAGMHVERGEWGTTTGQGDAEGGARGRVVQ
DYTGMKMRGRRDTEQACLNGRTDPMEGEDGDNRGEEDIRGEASGLKKCQQ
IAEDYERDENQRLKVKAEPIEDHQLIAMCP
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Synonyms
Publications