Naga_100148g8, gene5534 (gene) Nannochloropsis gaditana

Overview
NameNaga_100148g8
Unique Namegene5534
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:692965..697857 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100148g8
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:692965..697857 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL020ngnoL020Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02790NO11G02790Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5729rna5729-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5729rna5729Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5729

>rna5729-protein ID=rna5729-protein|Name=rna5729|organism=Nannochloropsis gaditana|type=polypeptide|length=1249bp
MEARSRKLARKNAAFEVKAEGNERFRNGRLRSALECYEEAVRMDPSEPVY
YAHRSTCLFELGKYAASCEDSKQASLLYRDKQQIGMISRTEANAAIARLL
RQSARAFLCVNTPHSLEAAKALLARTIELHPDPDAELLSMQAGACQAVAE
ADSAMAGEGSGPGYMVQSSSKHGRGCHMGIGGGSCDYLPRYRSPVVNGPT
PYSCIGWELGLSGLAGRVPSPADTESPFSAHGGTFGEDEDDGGIDLLARP
EGERDLALLFGGLGDARQPLATFRDIYQQVKGSKGQLTYKTMSLSMILND
VKAECLTRAVIMFKALAELGIILQEAAREQGMEGGMEGVDEGVAGTGSLD
PLALLESSDAVAEAVYRCYHLYLGAFLMPNEADWLQRTLNDMSKSNSLTQ
ASSLPGSDHDARVGSSPPLASTPSAGPSLLDASQSSTPFQFSSNLGFSWL
KIKAKKDREAVKNVVDHWRVLCKTMGADVMARIYQSSMQRPTEEDEGGLQ
TASHDRGGGTGGGARADAMEESNLSLEQQWRAQVREAMLEQIEAMDDEEI
NQMREAEGATPEEKRAFLRDHWAEDVDPRTLDLMRHLPAAHREIDFFHTT
MLLPVPTPEAARGMGLMDKSQGRNLHNAWRPNVTLVSADIPMEAMLPGKL
DKAAVASSSLTELHFCPFKALKLLLIQPGDENHLARQEAFRSAALFFSEV
ALGLAGFLEAGTLKMQMFLGDVHDLGSTRAPNSLDRVLISNVPDYTTLLP
SMIKLIPLLKTSPGSALKHSVLKFNANFQDLPEYAHSMGLYVPDMACLPT
YLGVNHEYGGIWAHLIEWSRAPPLLLEGPGEESLHLDMEKDESTPHRTSS
PAPFTTPLPPTQHLPSGRDVQAWLSTVFLSIAMPLCRDCVLTHTEIRPLT
LQAFFELCHYLVAHMDFPPHNLAWVIEHAMIGELTTAAVPPDKTPWLPQY
TWRQQQLSRAVPTGAFSLETRTLAGLWQPKLGFRLCAPVGHRLPRPEDVT
QLRLTVPWRQQLPCEGRESAEAVAVQAESCLKATGVPLAKVVGAVLVSPA
FLATHAEAFDPSKHYVQMPPHGCSHTACTFSSSPSKTGHEPHPTPENQGL
RPLLLAPAAQKSGDVHLFSCVRWDSRTSLVTLLMPKDDLRQLVARSFHLC
LLRTDSWQPLTKPFPLSDDPALLRPHIHAHMQEMQELRESELGEAVGETT
ESAMDVEIAEGGHIGAYGNPAETGRGMVSGNASLVATAEERLLHKYRTY
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Synonyms
Publications