Naga_100122g13, gene5507 (gene) Nannochloropsis gaditana

Overview
NameNaga_100122g13
Unique Namegene5507
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:615576..620798 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100122g13
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:615576..620798 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02230NO11G02230Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5700rna5700-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5700rna5700Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5700

>rna5700-protein ID=rna5700-protein|Name=rna5700|organism=Nannochloropsis gaditana|type=polypeptide|length=1700bp
MGRRQPQHPPAPTAQAVAATRAVEESSGNKPRASSRGPTPTVLTTNYTGS
SGTASISRKRNTNAIGGIEGVAGGTQKNLSVSIMNGSEDGADASPRFMLD
SKRHAFFPSDAYLHESLRSSPRHNRRLIRFEDTERCFWELVFTRHDRLRH
LLEDVCLSSGSRARQMARIHCATLVNDLVFVGLDVHENVLAFHRTERLTA
FLEELEGRVGPNPSVTAVEEFVRNCRPDFSPYLCAPPQEKGDAEYVLLGE
RGSDRWLELRASVCADCYATHLTNGLAVDVTGLKYNSDIQELYARLEDLV
PQCKSADVTLRLLFHDGADALAEVTVARGWNREEGRQEWVCVPRYAAGGT
RVDPHIFDPGDTLCLPQLADLGMFLPTTEVVICTRNCLHSTLGKAASPTG
TGSILAPRAHDDFPYAASSLEKSLGIPQGNPPGSISKPPKRTPSNKRVTA
KPKKPGSTGENDGYGPDLAPLPPLTKVSSLFPSDCPQTSLDAFPFPEIEP
GPVHFAGGGGGKTGKSKPTKRYTCCAPGCLQSATFKPADEPRSKNNMVCV
RHARKGMSCIKGPLCDHPDCVHEEVSTVPRRATFGFPAERQRRCGKHKLA
GMLYATELVKKRHASAQKRNGGTPGAKKKAPGLTTKSARARAASRHPYMD
EDEDEDEDGGCTGQEEAEYEVAATEDDREDDFLPKPSKRRRNAPSPTAAA
SPKVASGADRKHDEPTNSAFPSGLAAAAAAAAAGCVALTMTEADEEREQQ
VDVGPPLTDDAQQQMQAQDHPQHHGYMYPSNHFQTLSQQGPPSINHLLDG
GAPQSFSDLANHPSVSLAALGEQANEAFRFFMSKGSSGDMNFPVQPSPAT
AAAAAAIAAALPPHMLMPSAPMLQPLPPGAMPSYPPQLSSPSREAATTAT
ESGADAQQDQAVRFDMLVEAAASGKGRAKDQKAGERPNVYLSSEQGMETQ
SQPTQLHSQYGTHLLNRQSAYSIQHQQPQETMQNQHQQHEGSPPSHDALG
LTQSRALYQAPQQQQSQLQLLIQRAQQQQHAQQHGQQYHYHNDALNQQQQ
LEQYPSDQLQRQQQHLSHVQVDYGWGDLGSPSPGLCLGGMEEAFGRSPYG
GTTPKAYQQLMHLVSLGGDYSNQTANTGSGGMGGELDMRSKYDHGLRSVW
AGDVAVVIVLRSPQGSLSGLASLTKDVGFEPADEGIYFVKNVTTCDQSAR
NKGDRECFRRELHRLSDCLLPAPASNFQSAQSQLVSTVSGRTGTAKESQL
SFYIDQHKQALGLGEDAYLSEQMETGMGRKRPARRLILTWDPSGGAEIDV
EFSNRSDRLKVTEIDGNVVLRPLGPTGPWLENALTDFARQGLAFCAADLM
ALVLGAARIRRDAKLSSLGGKTAFPSKEGAQKEPDESLIREVEASYNLDG
CLSPQFDLPLDVLEGPLTALVSDPSAAFYVVSNFLTIRVGAQGCPRFTPA
SFIHFCNCFLSNRDPFGTAFRVWCEVTSVPSVEFRPNQSGQADEPVSAPS
QVRRAATSSTSTGQDCFLHLSDEAPGLILNWCFPRTTLELPAKSGTAKGV
VLGWNDRGRDSRLTWEVQEPRLQTLLTSHARSLGFDPTTLAGLAGAAQDL
TKGCGEKSGKFMETILEIGQKQPSRKYIGAKSSRDSRSVIRGLKVRWRFK
RSPMWTFCPRDGAANGRECLRVRTCVSAATMYVYIHVGRRGQASITSLME
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Synonyms
Publications