MTR, gene5504 (gene) Nannochloropsis gaditana

Overview
NameMTR
Unique Namegene5504
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:605777..610168 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100122g16
Gene biotypeprotein_coding
GeneMTR
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:605777..610168 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02200NO11G02200Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5696rna5696-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5696rna5696Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5696

>rna5696-protein ID=rna5696-protein|Name=rna5696|organism=Nannochloropsis gaditana|type=polypeptide|length=1279bp
MAAATSPDLAPDYPRFVRGRDSTLAYFHKLFRERIVIYDGAMGTMIQKHR
LSEEDYRGERFKDYHKLVRGNNDLLSLTQPAIIKEIHRKYLKAGADLIGT
NTFSSTTIAQADYDMEKLAFELNVESARIAREAADEVTAEEPDKPRFVGG
SIGPTNRTASISPDVVDASKRNVTFDELDEAYYEEARGLLDGGCDFIIIE
TIFDTLNAKAAIFAVRRLFKERGVEDTMPLIVSGTLVDQSGRTLSGQTTE
AFYVSVRHCNPFCVGLNCALGAKQMRPFLQRLSKVAECFVSVYSNAGLPN
AMGGYDDTPADMAADNSVFVKEQLVNMIGGCCGSTPEHINAIAKMTEGQP
PRPVAQKQQHMWLSGLEDLIVSKDRFQFLNVGERCNIAGSPLFKRLILAG
DYAKAMDIAKKQVEDGAMVLDVNMDEGLLDGLAAMQRFLKIAMTEPECSK
VPIMVDSSKFEIIEAGLKWVQGKCIVNSISLKVGEEEFKRQAAIVKAHGA
AVVVMAFDEEGQAADEYNKIRICKRSYDMLVNEVGFPPEDIVFDPNILTI
ATGIEEHNNYAVDFIKACKKIKEECPHAKISGGVSNLSFGFRGVNVIREA
MHSVFLYHAVQAGMDMGIVNAGLLQVYSDIAPDLLQVVEDAVLNRHEGAT
EALLERSMVEREKALANKGQATQTQAQWRSLGVQERLTHALVKGIDEFID
GDVEECRQLVSRPLEVIEGPLMSGMNVVGDLFGSGKMFLPQVIKSARVMK
KAVAYLLPFMEKEKEERLKEQGIAEVANDDSAYAGVVLLATVKGDVHDIG
KNIVGVVLGCNNYKVYDMGVMIPCEKIIERALEVKAQVIGLSGLITPSLD
EMVFVAKEMSKAGMKVPLLIGGATTSKMHTAVKIAPNYSTLEHPCIHVLD
ASRSVTVVGSLLGDDKEEYVHDILDEYDELREEHYAGLEERHMKAFEAAK
KLGLNINFDASPPVCPPAGGLGVKVVDYYSLEDVVPFIDWNPFFQTWELR
GKYPNRGYPRIFNDETVGAEAQKLFDDAQALLKDLVDNRRLQLKGVMGVF
PAARVGEDVEVYAEEEERVEGGAAIGKFCMLRQQQEKESDDPYFSLADFV
AAKESGHKDYLGAFAVACFGADEEVAKFEAQNDDYNKIMVQALADRFVEA
FAEALHREIRMKTWGYAPDEELNPEDLLKIKYDGIRPAPGYPSQPDHTEK
KFMWELLKAQELAGIGLTESLSMTPASSVSALVFAHPESQYFAVGKIEKD
QVEDYAARKGMAVEEVERWLAPILNYDQD
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Synonyms
Publications