Naga_100068g25, gene5495 (gene) Nannochloropsis gaditana

Overview
NameNaga_100068g25
Unique Namegene5495
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:585273..590128 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100068g25
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:585273..590128 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02130NO11G02130Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5687rna5687-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5687rna5687Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5687

>rna5687-protein ID=rna5687-protein|Name=rna5687|organism=Nannochloropsis gaditana|type=polypeptide|length=1553bp
MPASGEPSHDASTGTSDLGGQSGGHPEEHNTVYKNHLLPWIISEGLVCML
DNNMADFAMKLNLLCVSKGVHDVARLSITSLKGDERVLPFLAKFKQLRRL
HIMLCDNLVKRGNFPAVELSKATPLLEDLKVWKGSGFNADLVKSSKCIYQ
EYQERQTAEVEAELAGMSDEMLAGERFSMLKSSRAVAGRRKERDWRLRWR
TLQKVMKRRREPQKEMQIDAEVDLDLSARIKEPLTRLTGLRGLRSLKCIS
IQADTTMVVTPGIRTWMEEELPMGLERLSIHASLLEGPLLPAVARRVRRA
GGLPCLRSLSVHGVRRHHSEGESEVATCTLEIIELLTSLTQKSTPSLEEL
VVVHSVRPSSDIKGEGKQLGWLDFLVKDCPAWERETQALRGWWSRACERP
PHLYMLGVRDGLEAEGIPRLMCSGDPDLVALGTLMCCHMETMQHLYVDSE
CFRAMVGQFQDCHPIYARAHAVRALINYIVSQCDLQNGDIPISFSWVPVF
KDLIHFVFAFCEASTDLMAGELSDPMSVMLVRNLIYMANYFVRHGHVASE
AFQEDELVAVTVLAAQALTFRSHLSYTTRLEASEIVSRVFDHFMRQDEHA
RLRWESSVAAAVEKGLTASLREGEGKTWRPGVWKSFSPQVTPAEGTASAK
VAVMMVRLMLVMFHEWWEFGREMKRGRVPAKDVSKYAQKTDKHMMSEIVS
LMFVFLSKDAEAHLEALRAQKMLVSVVVVFLLDTSTPALLWFCSLPDIPP
WFPGFMVDILLGSRDNLCFPKYLTALLTAGVKRSTGMQLNPSVNLLAGRR
ILLETLFAPERKDRFWKVLSRHANQVGKMTLFSLLAEAANRCLLEPGGPV
GPVERQQLADAVNVLRLAEEGSSDALYVLRALKGEPESHLRDVLSQIQIA
LAAKTITGKPRPMKSSLFDELFVALAGLDANSLSTEASNLNHTVDGASQT
FVSSRGTATCNDASGTAETSAVVLSSLLDATLTQFREGDLMGRLCDFIEG
CKHKRTLTCLGTPQGKQVWKFPRLRILGAALSSLTLLSSVFVGLLAIPDT
QVSEQSSEIRDADGHGARSSKDIKSDIKRGDSPDKLTFGSHWYPVARSAD
DFLDAWVEVLTNVEKEPVLILGLARAAVRETGVVRRLCKRAACNRSIVNR
LARTLAMLSATVSYFPNARVETHVGAGKMLRHYEGANHRGGEREAARQAA
ETEWEGCRKEKESLEEGSNAREHPYVEKALSFGVCMVDPEAIIKCLQKSE
EKDASTPATFRLDEHVPMVVMALLARPATSGAVLKRSVLVVEMLLTRQRQ
RVLPSLDLPADTFDKKDHREVGCHGPAYEDRAILMSLNGTTGISQAFDKH
MVFLLQEEKSKIADQPGLFHLMRTSTVEELITYNAIRTLRFIIHENPTYV
LPDVLNPRCSVGLRGLVGDCLQFAPAFAKACVESCLPRLLMFLMECGKAA
ASSWEMVRGIMKAVPDLIARVSILLLLEEGGKEEKAEVRQEKPEGGAPVD
SYLCLYTLVSNWTCDRRVNRGDNKAAIEEFAALVPRKTTVQDPEKRRRLR
CQT
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Synonyms
Publications