Naga_100049g20, gene5456 (gene) Nannochloropsis gaditana

Overview
NameNaga_100049g20
Unique Namegene5456
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:474501..477951 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100049g20
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:474501..477951 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G01730NO11G01730Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5646rna5646-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5646rna5646Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5646

>rna5646-protein ID=rna5646-protein|Name=rna5646|organism=Nannochloropsis gaditana|type=polypeptide|length=1020bp
MVVQDDYIVVKSYRPPPQHVVSGKKRRYEAVAESAQHQARGGYGYLNEEQ
RECIMRCMAASRHVHREVAMSLYGPILVDVAGFLEGGRERRSVWQRVREK
FIASAGGNPRTKQLACDLSSYIGQETPFQDTHPGDTSALLPCAVIYPNMH
PTDRPELLSLLLQALHREHQTRRCLRGHIRSPLLGCTIRSTKHTTLSSIL
QVVHAKIMNAVDKLPLLARGPRKGGQRFRTSTAPQGTLGEVMSAYRTLVD
GLAVLNASSLVPSTGESAASVVCPSVLLLFEDVEALSNRLLEDLLRLLAE
ASAFLPARLVFLVSPAFALAQNLGNGATATLEPATFILPPSHVCFEQVLE
RLFLDACLPVTVSGQVLRFFRVTFFDLHYSIITFLRHLDFMLRVHFSQLI
SLLCMMPYDLVAEKDLVHVAAPLVDAPVAALWSGEKIGSASKSEGPLGDD
KSVPPEPSIASVVDGSSPAVPQSHGEEGEGEGKGGRGRSQAFFNKAHGTS
VPRSGDSDGHEHCQEHAQIDLQRQVLVLTREEGGMHDSHHLMVLHHMDNL
LRNRALRALLAKRLPPSASGAEEQHSEREQGEKAVEGYALSSQGRGGDRI
RQFQCLRGLVHQQVAGRFELRLGCYLIHEALKICGAPPTGQKSDASAYGT
DHAGNDGASRHSRHAERPAPSLPTRLMLLEVLLDYERPQRWRKLEASLWK
GLASLTLEGLKNLVLAWLHLLQALLEQMPLYVRRSSRAINDWIVRVRELW
MLLKALGKEIAKEGKQQQRRRKSQKLGTGSERGMGGRKVGAARDEATEEN
DEERRHMYRLKRHGITVDTQSLLADVIEHCTQTLAQATSYFKGAFWYTDT
QAIQEAFFAQPRASAVRALNDSQSYLRCACCRPGQLDPTMPDISLVYGLY
EAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGK
KRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIFA
YTLLGGKQERPQEEMTQETE
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Synonyms
Publications