Naga_100016g43, gene5378 (gene) Nannochloropsis gaditana

Overview
NameNaga_100016g43
Unique Namegene5378
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:297604..301431 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100016g43
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:297604..301431 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G00990NO11G00990Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5565rna5565-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5565rna5565Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5565

>rna5565-protein ID=rna5565-protein|Name=rna5565|organism=Nannochloropsis gaditana|type=polypeptide|length=1119bp
MDVEEWLCTELHDVVGYSDKTLSQFILSLAKRAPSAAALHVQLIGSGIEE
GPRTRPFAEALFQRMRSQGGKVGKGVARNAGGVGGRAAASVGERRLTNAE
LIRQSQRYSLVESDDEDYKRAISGTGDGNGTNGGKRRKEEKKEKREKKER
QARKKTAEIEEDEEEDISLVRKRVREVTSGAVMDAKEKGEDERKQEELDE
DIRERDAFVQRMLEKEDMKTQQKASGGGLSAEQIKELATTGAVSKEGEEY
LDEARKVSRREYLKKREEKELALIEKELREEEFLFGDVEITAEEKQRREV
KRKVLEMAKEKDRFEREHRGYRMPEAYETADGKLDTSKRDAALTARYQEE
EQYKTEQELWEEQQVSVASFRPGAKDKGAAQKDLTAEEAELEEFMFENQI
DFVSDQLLNNKLAKSKKQRTKKKEKGGEQERLSSTEESSEDEGQDEEQWL
AQARAPMTEFEKLQAGRKRLPVFRYREEILAAIKDHQVLVLSAETGSGKT
TQIPQYLHEVGYTQAGMIACTQPRRVAAMSVAARVSQEMGTKIGQEVGYS
IRFENCTSEKTVIKYMTDGMLLREFLTEPDMASYSVVIIDEAHERTLHTD
VLLGLCKDIARFREDLRLIISSATLNAERFSNYFDGAAIFTVPGRIFSVD
VYYTKAPEADYLDAAVVSVLHIHISQPVPGDILVFLTGQEEIETAAEELT
KRTKGLGSRIKELIICPIYATLPSEQQAKIFEKAPPNARKVVLATNIAET
SLTIDGICFVVDTGFCKQKSYNPRSGMESLIVTPVSRAAAEQRKGRAGRT
QNGKCFRLFTMWAFQNELDEDTVPEIQRTNMGNVVLMLMSLGINNILQFD
FMDKPPTEAIMQALQQLYALAAINERGELTKLGRRMAEFPLEPMHSKALL
ASEKYKCVDDVITILAMLTVGNSIFYRPKDRAVHADNARFNFARGGGGDH
LALLRCYQQWEESNFSTQWCYENFVQIRSMKKARDIREQLTGLCERVEIE
SVSSVDIDDIRKAITAGFFFNCASLTRSQDYQTLKHAHTVYIHPSSVLAK
DQREGVLHSHLVYHELAFTSKEYMRSITPIQPQWLLEVAQHYYDAASIQD
LSQKKKVPKAVGKAPETNR
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Synonyms
Publications