Naga_100016g77, gene5345 (gene) Nannochloropsis gaditana

Overview
NameNaga_100016g77
Unique Namegene5345
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:219418..225270 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100016g77
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:219418..225270 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G00640NO11G00640Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5532rna5532-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5532rna5532Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5532

>rna5532-protein ID=rna5532-protein|Name=rna5532|organism=Nannochloropsis gaditana|type=polypeptide|length=1842bp
MRCTHQHCQASSHVCPNSIGGCRDEIGASGIRGGRQALSEVVFSEVSSAA
PPQPGALSTRSRSTCSFPTTLSTCSSEFNAVPYEQIASMAKKECAFLKED
CEASQERKTTQTNLQVKTQEKREVRVEWQSCEETRREPTGSQPSIVGLCR
RGDIACMADPPAELSGPPESNKDMRNVQNALQALQLKESVSKFRHHECPG
QLRRSMEGKIDAVDVGDGGRIEEGVSGQGFGQEIQDPEESVLLGGAESKR
SIVDEDTVDGGESPKAGLASHGLNILRNILHGLQAASSPRHAFSREDAHE
LYDTLVELGEMEKDLSEYVHLMDRYEERLRVILEQAKRLATLEEERRESE
IEEHGHRLEMEGWRRQALRRLGQYRRWAMRSVPRPEFERVCHELVTVQQA
WTAASVAAAPCPCAIDATCPAPAIALQESTSSAGMIEEIKGTPLVPPPFP
DPAAGVAPPTAKTDRWHEPSYAKTWKTGEGEGIGEGERDRWEEERMDLLA
KLERYQGFEASTTQVNEKGTLWLGKRGWRRGELEKWEEDSNAAVIQGLQE
QILAYQTRSDEALARAELELELQSARETSKHLARKLAVLGANHRRREQEV
KALETTILEMKAGEEENELLIELSLLRTTVQELAVSALWSRRGKEGDVDS
ISTPKPAATPTASGPTSSFTAAFCARLKELDLSLRKLVRTAEERKQEITD
LEATVGQLRAEKEDLLKVSFDGEPISSGRAKKVAREEWGADDKEMEGSQE
EERIRERKIVALRGNTVGLVDAGGEDEDHGETTLSQKLGMRLLCVSQRLK
TSEWRLLQAQQELRRLKNERESCEGREERMARRPAHILQSPCSCCKDDFF
PSGCDCSSLCTSAIASPPLPPGEAAEAGSSRMAAQRSTFSDNNSSGERCR
GGFKAIQSLLRAFVGDAVRSAAAGGKERGSGSGDKHHKTDHTISRERSHT
ACLMNDAVQSHVSYTMPRRCTYPLYEEGDTKPRCWQCAQPFNRETGGRDN
NTFEEQEQGPKGMEEVMQIEKLRQANIARSDAEARCAAALEEEKKMRRHM
TVLAHQLQSAEERLFWTLKGEGLVAASVTRGVRFDGTLEEHMEGEREIRM
LHRLLEEKGGELNELKRAIWRLREDCIRAIHQEADEAKVEESKLLGKQVA
GDAQGPCSGVRTTVAMTRATGATQKRRKSDIGEEKGAVRNCEWEEMEEKE
LVIDLQEQMTALQQRMARARVALHAARTERDAARAALQASEAEKKCLSGK
ERKLELNLKRTRDELGKLKKNESKEVSEWRKAEGPGRVGLEQQVKALTAM
LLEQQHRQQQSRVVSHVARCTEKRKRDGQTEEFLKQVEKDKKSHQRIVEL
EQALEIQSAAVAKAIEEKEAAVNASAASARLLRVLEEGTQEDRIKGEASR
KNGIENIDRALAQSRQRVWELEEALGKYRRKAEVQLSGRLMILTRELEVA
KVRISELEKNALSSNGGDEDAEREKQKFECDMRWQEAENRATKADVAVLQ
LNYELNEAQREVTRHKRRLREILSSPEDLKLAVYGEKAKEDPRRNVKETL
QETAAEKAMRPVIGNEPESLQSGSIRKTSNLPSYSVAVKMRCLERRLREA
EQRLKTAEQEKMALTAQLTGLNEVGQRLSKREETLAQLRALIRAKEDALS
RARGRCEDLEGTEQRLMEKVEGQQQQLVALERELVCLRGIMQRRSTSHSS
SLSCSAMNEKTQHQGESSEAIACDNPHPALLPTVSDSSNPTSPLCLSSPS
LSSPTVNFPEAKMLLQTELQDCRASSLQKSDECDSLLKQNKRLLHELSAF
DLSFWEELEDLKYAHQQALTEARDAKERALKAEGKLIFGGAL
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Synonyms
Publications