Naga_100578g2, gene5328 (gene) Nannochloropsis gaditana

Overview
NameNaga_100578g2
Unique Namegene5328
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:172508..176537 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100578g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:172508..176537 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G00460NO11G00460Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5516rna5516-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5516rna5516Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5516

>rna5516-protein ID=rna5516-protein|Name=rna5516|organism=Nannochloropsis gaditana|type=polypeptide|length=1084bp
MMVLPLHGTFLLVIKLLLLHSVLLVRCLASEPPIFCDPEVLAVCPHDTFI
PYEEFSVSFPVIEYCIRPNNEGFIPVTRDTCESFVRGTWTVRPEWAARRA
SHTLQEQYRCTVCQAYNASALVADKAGVWIFTLHNTGSYSTKTFKHWGSL
LGDVSLNQLVVSGTGKRYLFALASYASAMKLLNASSNVLAAQPMPEELKI
SPRVVDRASVIASSVPSPSQSDGRGETSTLAIYSLISSHTDTILRASYHD
DALRAIHEALGLPLSPETAARVPPLPQAAPPQEVGIVVTHSNAGVGGSSP
GGGCNDCTVETTGHGSYLVSKVPVQVTAEVAANVSRALASAFVIDLAVPF
SLFNKEAAYLLQSGTNSTSLGVDGKRGSTWLWDQGLTGEGEVVGLADTGL
DVASCFFHDSEHPITFEPVYDPDTGAVVPTYQSAEHRKVREYFAYADGGE
GVLSGHGTHVAGSAVGYPAEMAPTSKGFKFRGAAWAAKLAFFDIGLPHDT
FLYLPPDLATGLFPRTYNLGGRIHCNSWGSSISDNSAEMRQTDAYLWEHQ
DFLILYASGNGGSRAGTIGTPALSKNSVAVGATTNNVDRPDVAFFSSRGP
TFDMRFGIDVCAPGYYVASAYSQADSPPNQCYIQGVAGTSMATPHVAGTA
ALLRGYFVRGFYPLGWPSAAHAFVPMGALLKAMLINSALPMTGPEATKHN
TRFIQYPNYDQGYGLVAAKFVTYFQGSENPNVLFVDGAWEGDAEGKGCVS
CPQLSQGQSARYEVVPTSTATLKVTLAWYDHPAAVTVSSRTLINDLDLTA
TQGDGSRYFANGWTSTAGPNSINNVEQLVIPDPLVGVPVSIQVVGASVAA
GPQPYALVITGQFEKSPQLFPNAVPKVLSVATDGKQGLLVGRNLPRASEH
PQSYTWSCVSDPAVQLGAQVLRYSPETAEFLAVVFNTTACSTFTVAITSD
GFEGNASGPFNYTERAVTTFCTAVASDDTCWGLTACAGQCLQTEQVEGGR
TTDVTDRTSVLVVVVVLSLLLACCGGLVWMRKHCRDEEEEDLWETTAPPA
AASPRPRRSNRLGKRPPASVAPIASPGKPSKHGR
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Synonyms
Publications