Naga_100146g7, gene5313 (gene) Nannochloropsis gaditana

Overview
NameNaga_100146g7
Unique Namegene5313
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:122021..124635 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100146g7
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:122021..124635 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5501rna5501-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5501rna5501Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5501

>rna5501-protein ID=rna5501-protein|Name=rna5501|organism=Nannochloropsis gaditana|type=polypeptide|length=493bp
MKRKAYKMNALLALCGNSREQDEGRKGTVADGGDIKLQKDSKENGVQEED
ERDVDLYKEVKAGLGVFTDARKIREAEEGKGGLRGRETREGATVLSAGKE
AALSTMESKKALRASLCEDNQEDKMARGKGKTTYRLAQRGDRPAPRGGTC
LECKTSKVKCDKVQPRCTRCARHGFLCIPQTRGQGRPAKWRMYLAEDAAI
QKEGDLWNAHSKALLLSAAQARSKEESISASSDPVRPAYLPPSGLPGLTS
TTRGTSLPASPPLPASLSPPLSDITGVSSSFRPPHSQFSSSFLTRASGKR
QMPPCSEAEDRLVAARSLKCLKNGDASPFPPPHPIVGSTSRPVHPSFPSF
ATVAGTRGAVDRNNYLGNGMGGYYSHGYPGSTQPNRPYSTPLRDMSLGTT
DRVSYVPPNDIFLDPVFPRCPPSAHFSTLQHPCYMGKPVTPPFVPSMGAP
PSHPPLHSSWAPALQPGGKFVPVGAPMTISEWLGKGMDGWRQR
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Synonyms
Publications