Naga_100089g1, gene5264 (gene) Nannochloropsis gaditana

Overview
NameNaga_100089g1
Unique Namegene5264
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:1009726..1019233 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100089g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:1009726..1019233 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016301kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G00190NO10G00190Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5445rna5445-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna5446rna5446-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5445rna5445Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna5446rna5446Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5445

>rna5445-protein ID=rna5445-protein|Name=rna5445|organism=Nannochloropsis gaditana|type=polypeptide|length=1495bp
MCMNLWGEGGSALFPYYRCRKCALLVHAACRSFAQRAVACAPPTPLRKRL
KEQGTLLPADPDLLNAPGVLTLRLKQAYDLPLPPGARVYAKISLWPWNEL
RKTRVALVGIDRDAVWMSGGKNGKSEQAPPSYTLLHPYNNPSNPLPVLHL
ELCVASSAAYLTTILDKRVGVAEVPLLPLWAFPWVEVERWHILSKAQASR
EEGREDRDEDEAEGGGEEGMGTKGMGSILFSLSFTPTRSASASLDSSLAP
SLSMSVAGEGRGKEGKELTEAYAHSPCSSSSSARALPLSAASTPTRPQQQ
HPQDQLSASLPVTDHLFTLHSYRGFTFCGVCDSLLLGFVRQGYRCERCGL
DAHRECQLQAIIQRPCRGLASVTEEDGTEEREGEETDAGILAFSSAFSTP
VHGRGDRSGDEIASARDGGLQVTGKSGAGRGILAGSTGRPSPSSGPISST
PTIPPLPTPPPPSSSLSDSVSRGMGGEKGREEGGGRGEGNGEGGGGIGVL
ELKIMEAHVCAGKCTTEPDGSINHHSAALSEAGGDTGAKDFYCRIKLGPV
KEEGGNKGVISRRTRTIYKTLNPVFSERWTLSVPHYRALVSVRLNPRPFL
FTHHQSFFLPSPSLPVLFVMFSASLLFLSCVLPTFFFLSMHHRLPPCARS
ARCLFHPYQIELMDATRERMVGRKEWPIFQLLQEEADRKMRGRERWRERG
HGETEEEREQLVPISVNDKELGYFRLSIKFKEDMASLFLAARPRPVPLPP
QDDLAMENLRRVLDRVQAVLACLRTFQAHYAYIMNWEHPPTTLLFLLLFL
YLCLCTEAEKAGALLVFSVLTFMTYALYCRSSGRYSQLWIEHDPEDDTLG
EGDAGSSAMERSSAPISTSLLSKARPYRAVAKLKVSVGRIRFARPADGRG
MTYVTIAYAPHGVDPQDADSDLLIGCCSGLQGDEGSYGMLKALDLDFALP
FTAASQMGARAERASLFRNICVWESREGAEAEKKKRKERENDDGQPSLSS
LPNQEDGHWSLLWPILQPIGFLPDQPPTKRKLEALPFAALRGCLRIRAYQ
DSGLSTLEEEYLGQAFLPLAAVVQRAVPSSFLSSVPKGPTTNVREMEGWI
PIGVFNSLSYEASLREEAAGEKKRLSIPNEAPSVPAQYGVDDLGGGSIGT
EEGGKEEGLRRLPSYYVPPQPTFPPAAVAVYLRVSMETPPVAAEMHLASS
LSSSSAPSLSSSSSPLRHPLPTPADMEESRTIETMLEQEDITTPAPPSSS
STGGVFSSVWNLRSTVKHFQNLLDGYLSYAESWKNLLNWTHPQKTLAIYA
ALWALWLICLLLPTRYLILVAGLYEFTFRLFPEQEEYPNVIRAENLLASI
PNDDDLRRVYYQENQNFLRKKRERVQNQKARRAHLSGVWGFLWEGNVQTR
AAGSNQPWRQAYAAVQGNRILWWKTEKDLDRGGIRVPEGQIILRGHAGLT
SPSPLEVREAVREDWVICIPLANKVKTNVQQEQKSKHIERCEIVE
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protein sequence of rna5446

>rna5446-protein ID=rna5446-protein|Name=rna5446|organism=Nannochloropsis gaditana|type=polypeptide|length=1311bp
MSGGKNGKSEQAPPSYTLLHPYNNPSNPLPVLHLELCVASSAAYLTTILD
KRVGVAEVPLLPLWAFPWVEVERWHILSKAQASREEGREDRDEDEAEGGG
EEGMGTKGMGSILFSLSFTPTRSASASLDSSLAPSLSMSVAGEGRGKEGK
ELTEAYAHSPCSSSSSARALPLSAASTPTRPQQQHPQDQLSASLPVTDHL
FTLHSYRGFTFCGVCDSLLLGFVRQGYRCERCGLDAHRECQLQAIIQRPC
RGLASVTEEDGTEEREGEETDAGILAFSSAFSTPVHGRGDRSGDEIASAR
DGGLQVTGKSGAGRGILAGSTGRPSPSSGPISSTPTIPPLPTPPPPSSSL
SDSVSRGMGGEKGREEGGGRGEGNGEGGGGIGVLELKIMEAHVCAGKCTT
EPDGSINHHSAALSEAGGDTGAKDFYCRIKLGPVKEEGGNKGVISRRTRT
IYKTLNPVFSERWTLSVPHYRALVSIELMDATRERMVGRKEWPIFQLLQE
EADRKMRGRERWRERGHGETEEEREQLVPISVNDKELGYFRLSIKFKEDM
ASLFLAARPRPVPLPPQDDLAMENLRRVLDRVQAVLACLRTFQAHYAYIM
NWEHPPTTLLFLLLFLYLCLCTEAEKAGALLVFSVLTFMTYALYCRSSGR
YSQLWIEHDPEDDTLGEGDAGSSAMERSSAPISTSLLSKARPYRAVAKLK
VSVGRIRFARPADGRGMTYVTIAYAPHGVDPQDADSDLLIGCCSGLQGDE
GSYGMLKALDLDFALPFTAASQMGARAERASLFRNICVWESREGAEAEKK
KRKERENDDGQPSLSSLPNQEDGHWSLLWPILQPIGFLPDQPPTKRKLEA
LPFAALRGCLRIRAYQDSGLSTLEEEYLGQAFLPLAAVVQRAVPSSFLSS
VPKGPTTNVREMEGWIPIGVFNSLSYEASLREEAAGEKKRLSIPNEAPSV
PAQYGVDDLGGGSIGTEEGGKEEGLRRLPSYYVPPQPTFPPAAVAVYLRV
SMETPPVAAEMHLASSLSSSSAPSLSSSSSPLRHPLPTPADMEESRTIET
MLEQEDITTPAPPSSSSTGGVFSSVWNLRSTVKHFQNLLDGYLSYAESWK
NLLNWTHPQKTLAIYAALWALWLICLLLPTRYLILVAGLYEFTFRLFPEQ
EEYPNVIRAENLLASIPNDDDLRRVYYQENQNFLRKKRERVQNQKARRAH
LSGVWGFLWEGNVQTRAAGSNQPWRQAYAAVQGNRILWWKTEKDLDRGGI
RVPEGQIILRGHAGLTSPSPLEVREAVREDWVICIPLANKVKTNVQQEQK
SKHIERCEIVE
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Synonyms
Publications