Naga_100135g6, gene5200 (gene) Nannochloropsis gaditana

Overview
NameNaga_100135g6
Unique Namegene5200
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:847398..850311 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100135g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:847398..850311 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL017ngnoL017Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G00770NO10G00770Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5379rna5379-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5379rna5379Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5379

>rna5379-protein ID=rna5379-protein|Name=rna5379|organism=Nannochloropsis gaditana|type=polypeptide|length=718bp
MADPPDPRQSLPVPPPPPGMPSRPVSSPIWAKDQDGKDLVHSNDEELKIM
EPGCLEVLREFSLKSYVFSSLGYYKARPAALRREILSGITLALIEVPESI
AFAFMAGLSPSYGMASVVWLGTLTGMFGGRPAMISGAAGAMAVVMGDLTR
EDGPLRDFTRAERVEHLLMCVVLIGAIECLCAPFLCGFVKIIPQSAMIGF
MNALAIILVKGQTETFRICATPDTLFNDCPSADEVWLGAGDAQTWSTLAL
IVLTLFIMWGLPKVKHVGHIVPASLAAIVVGTAVEWGLLRQVWDADGAGT
RTVGETAELAAGMPGWHFPDLPASPAWGTIWAYAASLALIGGVETVMTHE
VVNSLVKDPPSSFKANQECVVQGIANLFTGLFQGMGGSALVGETVINVLH
GARGRLSSTTAGLTMLFIMLGLSPAVRLLPIAVLTGIIWSVALHTFQWRN
LMQLHKVPRADAAIIILVTALSVVTNLAIGIAVGVAAASVWHVWSSGRML
TASAAVGVPEGKVEAKKGVEGEVENGEGQLRKVYRVQAPLFFGSTRSLLC
LFDYLNDPDDVVVDLSASHGGIQDLSGITALNEAGKNYEEVGKSVTLLGL
NPEALAMIEAYPDAASHLRVPALRKRKEEKERHGLDACLGHDTDVLTLGP
DGLELGLEMGVENIHPPILGWGRRDAGGKVQTNHVRQAGGRVKCSQLKTS
GKECSKGRSRCSQSSALS
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Synonyms
Publications