Naga_100005g125, gene5147 (gene) Nannochloropsis gaditana

Overview
NameNaga_100005g125
Unique Namegene5147
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:722369..726743 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100005g125
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:722369..726743 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL017ngnoL017Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G01290NO10G01290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5326rna5326-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5326rna5326Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5326

>rna5326-protein ID=rna5326-protein|Name=rna5326|organism=Nannochloropsis gaditana|type=polypeptide|length=1426bp
MKDKTVAWAGLYKARPGSSRLDFGPFLVTYVVLLAVAVAPFTIVEDRNES
VTTSSTSERNIPLWILVAWPFVLITHLLTHLSTHWSVACNAAVSYTQVST
VQEATHVRVRPPRNSGVEEIVPLERVSHENVENGGGTAVLLPKDTAARSI
TVVGEDHSLPYARFTFQKTVFCYWKPAARRTDFERLSYPTCGLVQHFHAR
TGHTQEQEVAMAGRIWGKNVFDIPLPPFLELFKEHAVAPFFVFQVLCVLL
WSLDEYWYYSLFTLVLLVVFESTVCYQRQRSLEELRSMRRPPYRVWVHRE
GRWTCLSTEALLPGDLVSLGRMNAHPAAGAEEEEEKALRSRAKGSFLAKF
KGKGGGSNRRARHQAHPPPPVNAERGQGEEAPPSERLVPCDLLLLRGSCI
VNEAMLTGESTPQLKECLEMEGSEGRRKRGGMEGGGGPEEDLVPPPFFSL
GAGVSANAHVRSHVVFGGTKVLQLGEEKQAQGEGKKSGGSKSNVRGPPDQ
AGALGFVLRTGFETSQGQLMRTILFGTRRVTAGSSETAVFIGILLLFAVA
AAGVVLRDGLKDEGRNRFKLGLHCIMIITSVVPPELPMELSLAVTNSLAA
LSKALVFCTEPFRIPYAGKVTTCCFDKTGTLTSDDLVLRGLVSLDGRQEA
SSEKIGSQGRASPGAREKEAAEERVLPPTEVAGPALWVLVACHSLMTVEG
RVAGDPMECAAVEGLGWMVSGEGNMVLPNPASPVMLQRRGPEAPRQERDK
AALEDMQPIRLHHRYPFSSSLRRMSVLASRPALPPSPPHSRQLLILTKGA
PEAIRPFLSAVPSNYTSSYLYHMGRGRRVLALAYRVLGPGTDYNAARQLS
REEAEKDLTFAGLLIVDCPLKKETASVMEALHASRHRTVMITGDSALTAA
EVARQVGMVPHGPKETLLLGSRPAGKGGGKEGGRESNGGLGWETMADVVG
RRGQTDEGGKAECQERNGEKGGSFIPFSVEGLGDLAARFSLCVGGETLAE
LLAREVGPAVPSNARGIAEDEADGDEGARVGGKTASGRTGSMSRETLRWL
AKLCPHVVVFARVAPEQKEMLIAALNEAGQVTLMCGDGTNDVGALKQAHV
GVSIINSPELEKRAEVTSAKYKAKLEAMGTGAEGRASRAQVQAAAGVGGK
GASEEEISRMAQILAELREQDKDPGIVQLGDASIASPFTAKRTSIDCVLA
IIRQGRCTLVTTLQVYKILALNCLVSAYMLSSLYLFGVKQGDLQMTALGL
VVAAMFFFVSRAEPLERLSAERPPSRIFCAQVCVSIVLQFLVHLGCLMDI
LERAKPLLTLTSKDPSIAPDGPFRPNLVNTAIFLLSAITQVNTFTANYRG
HPFMQSLSENKALGRLSAGLYALLFLLTLEIVPSFNRWLQLVHLPGPFRQ
HLMYLLLFDTGAVWMIEQFCLRLLPI
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Synonyms
Publications