Naga_100005g61, gene5092 (gene) Nannochloropsis gaditana

Overview
NameNaga_100005g61
Unique Namegene5092
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:582861..585927 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100005g61
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:582861..585927 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL012ngnoL012Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G01970NO10G01970Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5272rna5272-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5272rna5272Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5272

>rna5272-protein ID=rna5272-protein|Name=rna5272|organism=Nannochloropsis gaditana|type=polypeptide|length=824bp
MPFFAAAEGIVAPDPGQIKAVYEDEDSPKEPAREEWWKCLALLDSDTVGL
GSNLCSFCILDVRPSQGYTTLYSWRSEVGLELLDMQFCRKTKEWWTLEKK
LGESQNLMLVRYSDRPRTGERVVALISSNEAVLSVSINGTVTLSLPGGIV
EFWRYISLHKHTQEIRRLGILSLEPILGVSMEHVLFTHAVLTGPVLTLGT
SSDVWFVQLRRKTLQAACKESKRGLKEDITYDTQGLLDCQSGGVGGLPAC
YEGCPLGSFIDRDDMLDCALPEQDECYAGTLRDQERARPKWVPECPKDCP
EYTEAAMVLARVKFHRPGYLISEIKVISVGSTWVELLLVSGQGACLYRVS
KLRMGTHEDAVLLSSSEALRGDGREGAAVVFRLADLQLKTKVLATAKGAA
AEAPWLFALTLSGIEVWCLPPSGHRPADFSSSRLLVQRLEYRQRLERLPP
VSMVATGNAVIFLANPHGQTPPSLAEMLFHTVPRPSLARTPELSSGVLDS
DSYNGPITPDGAFSIGYGLLSLHTLSLAEIYEQLRTEIMHALLMEEGMPE
DGMEEDNEDFAATRFVEGEMLDSSVYGIQSPRVVYQSGTELLAILYAHLR
VAADVGGMECSSIVWRSEEYKMDREGLNDDSIVERARRRHVEKLYRQQQK
DCATILGMLCLDPRAEGVSSDTLQACDWFSDSNTPLLTVCIKLLKLRTKK
DAFATKEQQQTRPMARAESAALRRDPAGLLVHFLRKRCSRMDNWIEEKRL
EEKRPCQIIEGRSSLDIWSDVLTLCCDIGEEKFLSWAVLHSWLPRLPECR
DVLRHIIDTRCFESREKLLMALVK
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Synonyms
Publications