Naga_100005g57, gene5088 (gene) Nannochloropsis gaditana

Overview
NameNaga_100005g57
Unique Namegene5088
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:571050..575018 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100005g57
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:571050..575018 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0007165signal transduction
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL012ngnoL012Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G01930NO10G01930Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5268rna5268-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5268rna5268Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5268

>rna5268-protein ID=rna5268-protein|Name=rna5268|organism=Nannochloropsis gaditana|type=polypeptide|length=1322bp
MSSSRQGYLWKCTARDGGGSPSAMQRVYCVLAGTTLWDYDTEDEAALGQR
PRSEVDVIGVSQWDGKARYQNYTFGFLFLSTQGTTYYAVAHSKDDLEYWL
SAVRVGLQVRFGMRKVTSETFINISQKEVEDGEDEDEVEEEEEEEEEEMR
RTVGRAHVHDEGRRKQAEDGVNNSDRGCRDGSCEKGVEMKDADDGMERVG
EGRNQAKIYEGTSPRNECNLLDGMPLAGVTGVQADSRRHCEVSRPDTAVS
AGGIPTSGIPGPSTTSSRTRKGMADKPMRRTPHPSALPERSDAGDVVTGG
ECRQDSDTCGISGQPLGRSNPRHSCLSCAGSFSSEYCSDEVPLLHFQYQQ
AVRVCRNCFLAQYFLNHLKLLSATLRTHLYELALEGCPVADKNSAKNRVF
RRPSAGALLAWQLYDGGQIDAKEFSELLKADARLQDERVNSMLGDFKVTL
VQPGVGDDAITLLRLLFDLRDEGQPVKYALILERLLLIARSDLAAVEFVL
PQLLQIYVLKSDDGGVNQILQLEALEDFLVKICCVSSAQIPLRVVWSMMG
YYEDTLHTNAPPWLMARRGRIIRLTLRVEAAIRGAAHEFSVEMLNIFSLA
APAQLALLRREWAIVQETRQHPLLRPFPPMTAFRKMHGEIGDDPSAAALA
VAESSRAFDSSFCGQRSRKAQGAGPPSTGLGNFEDLIAFTAQINFVKSLT
DTAESLRHIDPSLRKETLRASLQRIQHHYRGVYFPLSRDLESMPGIIRLC
VDEGVVFRSKARVPILVCFEVIRLAQHRKRGSVLGEKGNIEAGSNGQTAR
RSSTSAEYMSKQEAEHLLDKGALHERMSSLELGAVCHQSGGQAKLEAGGS
ASEAREEVDQTSYLARNAAIRAKSDLHIDNVPYAVAPNAMQRYASKSEVL
QMVQTRRRRTRVDALEITTNEAFQRFPGEHDQSSATVASNSNHIFQLHNE
RCTVEQDMRGEDVFVGTTERADAKMASEVSPAVATAIQEFKKGNLTKAEF
EMLVAKDQRFRRNISENSYLDDQFFVSMAFGESWASKRARVKAASPDGNR
SGWDLLSMIVKSNDDLRQEACMVQFIEMCQVIFREAGLDLWLEPYGIIST
TSSTGLIETLTDALSLDALKKKDGYISLAHHFQSSYGHDAARLLQAKHSF
VTSLAAYSLVCYVFQIKDRHNGNILLDTEGHLVHIDYGFILGIAPGGSFS
IETAPFKLTPEMVEVMGGVDGALFDEFAALFAGGFFALQLNVERIMALVE
IMAEQSRYPCFQATDRSVILQRLRSRLLPGGRLPVSKVDTVAFALDLITQ
SYNSITTLQYERYQNFTNGISI
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Synonyms
Publications