Naga_100005g2, gene5036 (gene) Nannochloropsis gaditana

Overview
NameNaga_100005g2
Unique Namegene5036
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:446977..456006 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100005g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:446977..456006 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0007165signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005515protein binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02520NO10G02520Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5216rna5216-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5216rna5216Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5216

>rna5216-protein ID=rna5216-protein|Name=rna5216|organism=Nannochloropsis gaditana|type=polypeptide|length=2813bp
MEEKVEDSSTGDKDKGSVADLEFGSNSVDSMGSDCSNCVSTPRRQPMHST
MGKNCENSSRGRGDGNAFKNESELPSLLTAAGRGLSNNQTGGNRGNRKCY
GNETVNSNGSVHAGASSNSNGKAECTDNGSKDSGDGTLSVHPKPKLQGIL
KKEGLTGGNLGRSGMGRRSSSFYAPKGLSRSSNSLSTRFHLVPPSKTVRF
RLESDNEKRPWFALLEIMDPGSLFMVRWKSLCIVFLSISFFRLPVIMAFG
AHGLLIDFICDVYFFIDNVFALHTAYLKKGELITDRRRIARRYFSWKTFM
RGERWSYLVFLMEFVPFYSAIIIMAFYTLPDWFLTLCAASRARRMYDLLS
YFHALELRLDSDLRVLAVTKYGLVLFGSAHWFGCVWWAVARFSGFTESCW
VSQFLRLTARPVSDESFRSTSFNYFLSLYWGFTVLTGTMVPGYAPDSSQE
TILSIVSIFSQVLIFSFLFGILLHYIVKKDANQEKYKSLIDKVERYAKMH
ELPRRLESSIKLCFTFQHQNRIGQDEEILSAIPMTMKTKILAYRYQMVAA
NEIFEGCQEHFVTSVLAVLRPKILIPGVTIFNRDDMTREAVFLEEGEVEV
HAEDDAGAFRMIKPSEDVFPVVGAIAFFLGIPQPYTHKASMKSHVKLLTL
SKDDYEDIRDRYPESRDQLIGNITAAVGLTRDGDMDDISGAVVLEMESPM
GMPTDVGGDSNAAPLQEQRQRRQQQQQDQSQSQGVTAADLGVRTGETEKV
ALRRKVALGLRKKMDDELATMFNAVEEGDLESVKLLLDKGFKVNTTDYDL
RSSLHFAATRGEDKIVELLTQRGADVHSRDRWGRNALQDAIDNGYTVVAS
MLAAQGAELRLRNSAGRLCAAAFTDNLFELQRLIENGVDCNVVDYDGRTA
LHLGACEGNNKVVEYLLLPINKCNPGVLDRWGISPLFDAIKHGNLSVARV
LYENGARLSKGKAATFLCTAAANGDSSLLQMLFECGVETNIGDYDYRYPI
HLAAAEGEVISVEFLAYAHAELSVKDRWGRTPLDDAITEGHLCCAKMLMS
FGAEYTISIDAATQARIDAVDLKEVRAMVRAERTVQNQHKSVAKQLREMV
KWMAAETETWQKSVEERLKHLKRTTDRMISGDEIDDFHLDTQDFLAQSDL
SILVSERPERVTIESNMSYPDSYMLSRFISEASSSSDSAREFTSTSNAAK
RAISSEATSSDRKQNHGLKSMQHFFLKWSLIHSAIKNWKEHLIVTARRDM
HEPPGINKTALGTALRSLGVSVTDHDLDRAFEACKSGTEEVDTAQRVSGL
GEIEEMTFLEGNAMISADKAANAPESVSCEDVVMAMPVWSFIMHAPAAGG
SDLSRLQEAVHVICEGYRLLTRHGNGKLGRAAWMIQKRETDLGEFSSVID
QVFLDQDVIDKESFFLTVARWAALRDEDNGVSDDYGSGAYEKSTVLGLSP
DDDASFQSQGGNLDKMPSGVAKSGTLRESRMPCDLGHSLSNSSWPELAAN
RLYLDRIESDSSLQGQMGSLSANQLPHLYVKKRNLWTRLCTAWKLFCIKR
KLRASLKAGEGQSRTQLAMPDFARHFARLDLERCDWLDRNRTELLLARGF
DADLSRGEWGLLAESLKDNVVGKVSLAAVERFWMELNGVSAKLQVASALD
ASQRGINSLNPSQRVLKDNAAFDAEGSKRIPGAMILVERRSWSEALLFDR
KGWFISMWVVVMIVNALYYFLSVPFIIAFLRDEILGEYESCLWVAYAFDC
LLLCDVLVKLNTSFIDTSCSVLVVNRRRIRHRYLTGGFLRDLVGMLPVDI
LVRFLGGSGTLVAFLRLPKLIFCYRLVNFFRRRSLNSSSRLAVDLQALLF
SALGMIHILTCVWFFMTEGDPGNYQALSGYEDYGNYTNDPSGGGPFRLEY
YIFCYMLITTIISTQGIYDVVMGQVREIWFTMFILLLNLSAWAYLMGTIS
GLCVTADESIAQSHELMTAVSRFIQHNPMPPGVSEELKGYFNINAQQKTQ
LSLTEQTQIYHSLPLSLQVEAARHISRDSLLCVEIFTKTSEYFLDSVSTL
LDMELFGVGDYVYKADDICRSLYIVASGSVEVGKMNSETNEFEVDEIAGV
GYALGQLEFLFDVRYMTSARVSGADDVRVFRLGKEDFTRVIKLYPMDEDI
LYENLSRLADDKMETSSRAPSTAQSMSTHSLDFTVVGGDDLMEKAMDSID
KAKKRSKEQRIRSFCNAAAEGNMDILQRLLRSGIDINGRDCNERTALMLA
TCADNFELVKWLVSLGAEVNLRDKFGGSALLDAMRHSTPLHMEIMGFLSK
QGAVLELDDAAGELCQAAADGEKEKLARMLELNTSPDVADYDKRTPLHLA
ASEGRLDCVKLLLEYWADVNPIDRMGGTPLSDAVRHGHLHIQTLLRQHGG
KLNMDPFELGTCACEAGSSGDLDSIRVLVENGADINTGDYDGRTALHMAT
CYNRLSVIEYLVSLPSINLNPLDRLVNTPLDDAEREGQGAIVKILQARGG
VPGTHPSLKDQVAQQRQKKAEAEAVKKMRREADARLFEEWSLVQEDLSRV
YSFMSEYLPSLCKNINILSMTLRSRRTQSTIDRSPRPDLAETRLYFYKSF
LAFLERRYKVNLEMSLTLIEELEEVTSFEDKARIAGYIVERFLDAKSSDR
VHFHPTQVGLVKERLLAAFPEKVFPVDLLEPFRASVVEKMEELLPDYFKS
DFYYRACRQPNGFLWRVMKLSRLLHGLCNQILVDVINPFLKLCNRDALAC
VPHYSKSNRQAFREEFVKLKNNITSLQPVLHIVGYKSKHDAMQECIKERR
EKRTGNGGTGHRK
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Synonyms
Publications