Naga_100037g1, gene4861 (gene) Nannochloropsis gaditana

Overview
NameNaga_100037g1
Unique Namegene4861
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:978523..992242 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100037g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:978523..992242 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G03880NO12G03880Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5034rna5034-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5034rna5034Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5034

>rna5034-protein ID=rna5034-protein|Name=rna5034|organism=Nannochloropsis gaditana|type=polypeptide|length=4475bp
MLEGLLARFLSSRVGHFVDGVDQNNLNVGLWKGEILLHDLRVKGAAVDDL
LGLIPLGLAWGRVGTFHLSVPWNAFGAKPLVITLKDVTLVFRVLTEEGSR
GADGGDGGGGGASRTALRRRRAAKEREVQERLRYLQASKQRNGEGNGVSV
QEEQERRGLAERLFASLLENVQLRLSNVHVRLEYKEEGSFVRKQQDGEGA
AAGGDAAGEAPKKREKIGDDCGHRIEGNEVEEEEPAGPVRCHGHLQEDFL
VLGLEMEEFTIENHSAPGEEGIDDEGEEEEEGEEGQVDASARGLSKGQSG
GKAGMDVRTRATTVRKRALVTNLALYCDPHSPPWVPSSLPPSRPSSTVAP
GFHPLPVTTLVKHDYLLRPTSGALMLIARPVPLSPKRPKHDLSCHLTDVH
VGTTLAQIRCLRALVHALTSTRRVWEDLAGDMSGKDGWKGRRRPLGRVTD
DPRGWWQYAAGRVLRGKEALAGDIAISPSVAHSQTTPSTGPQDAGGLAPS
LPSLPVPLAPTHRLGSGLPLPVHPPHLPTWPQLVSLVQTRHRYLRLHPRR
ALLLPAEAQSLQDLDDRLEVEEIVFLRLVAHARPKDADASQIGGPAEPQA
EQEAESTVVGWVKSWFEREGGRNGGDDEAIALPGSGETTGGKPHDPELVS
AADRLALEETALDYARSLAQVTIPPTYVITRLSLSLNQGSCTLYLSPTRP
LARLVVDAASTFLLRPFSWSVTMALGALEVLDLDPLTKYRTVVTRKIRRR
AAHTPATSLPPSLPPAMMVVGTYRVPKNADLQIHYNKGCEEGGRDLAVSC
RVLPFEVFYSRRLLEALRHVCMPPLPSMAPRKGEEESEGVTEGVRHGMQE
WQARQRARLLSRIADRGRIMLDIDIQAPLILIPETTRAEEGQLLVLDLGC
VVLCNREHEQDEGKEDEADAAAWTLRMQHMAVEMCRLGALFLEYKENDVD
LHPIVEPFDLTLDIQTCLDNAARASTHASIQASLPRLAVNLRASTIQYFH
RVFHRRRSQARAKILADTPENDRHGRRVRCRDEGRKLGTKKTGARVKDLR
YNSTAALQAPREDLSANVDSTPAMGKQDHARVKDGISAEEEEREAYVQAG
RVLNVTFTAPNIALHLVDDLVSPLPSGASSNFPCSPSLFPLVDVAVQGIE
GRIVAFDYQEAAKATTSINLEIAFVEIKDRHHFADASFSSLFGPLHDEMG
EAMEDAGKGVSLLSVAIVHATRGENLSRSRTCGGQRKESTEVDIAVRPVQ
VQWNPETVAALQRFLAAQKQESVRNAREEEEESRQLRDRGNVVVESRGRA
RGDRIPPSDFHEEGRSFPTLGEDTTPSYTEGLGHLFSLYSSTSSTDQTQP
SISLSSFRLSTRLRTVSILLNKEKELRRLLRLQLRGLDLTLKGGGKAKAL
QGSIQGLTVDDLGNADTCFPRVLDGQKKGCLALSFSYSSLLPPLVSEASA
GCDEAEEGGERGRDSAKGIVPDNHLDVVVGPLQVVYYNHLCLEVIDYVNE
GVLGAIISSTLRSADALVRQRAMAKTGFTVSLAHPMAILPRYLTHLDHAL
AVMDDAVLKTVFENLHVPWVGEPVVDENSAGNADMGSTSTSGGAKDGNAW
SDTSQSPTVGQEYDIVYDDEDVEAREKAKKGEVIVLRRFDLAFSSAVISL
ESPALAGHPALFSTPFSFQVHVTRPLDVEYGNILARRHREAGSTTLDLPS
IAVKAALPPLRLQASHESYSLLRRVVEDNLLTQEHHATNMLKALRALDLP
PLATRSHYHRNAGAEEGKACMHCARAFQGVDDGAHTCPQCGDQICRRCLN
VSVFDKSSAVVVRVCGACARASFPSLFHSGEDVRLSWRTRGQEQHAAHVA
YSYGLIDGPLSDIKVDVHLSGLELNLLEPSLPSLSPSPSPANEVLDWRAS
AHFVIDETKILFRRPEDDRKILDVSLYRCLVDASSEVSRQVPREASILER
ILSPSMEALEKGPSGKTSGLSSSLPAPIDVLPSLPPALAPQFVYRYVSAP
REPPITHLVLNHLNVVVLVSPLLYLASFFGCLAPDHSEGLGEKDEGVAKA
LEELSFPSMEKEVGKREGELLQGPTPDASPRERLSEEAIVQESSTSNRLL
PSPAIENAPTDEAEEVLQEVIRRVKIMVHHPRIIFPERMPAYGGREDRQS
GGTKAVVMRGLGVGSYVQELERRLDGALLPRSKWNAHLDGLECFITSFTI
PSTSISAPSPAFRSSQPPLPVEENVSLLNPTSVSLEYTRAYSLLRSPLRH
LHLSLDSITTYISYQDLYILGRVVESWYHGNLAHERQVLPLNNPPEEQGE
ESAPDAANTRATAPVTAVGGYYELTFAQQKLGLMLRKVDGMAVVEGLSID
DENETKGERANRTSGVYLPRKGDVIWSINGKPSGDHSEVLRSVRTLPRPI
ILGFCPRGEPFTLNAPLSSVFLHRSTLPDCLLLSEKAVGEKGGDKEGRKA
TAMLVSVEGKSIEGLGYQTALATLKEVAAQAEYARTRGENCRTALIGVRH
LGQPVCLQDLEVEIGSISLVAIDDLDGKDLPLLKSRARNLKTRVREWSYA
SGGREETRAGMSIVLAGMMVNTQVDYYNGRFGAWEPLLEPVGVSGSVRRE
TASDCPASLHGLVSDRTITTTLNLSTTDALCLNITDALLELAQRISRGPK
SSPSQSVSLAPPLPSMDASFPHQAHVSGGTTAATSVPSQAPNCRGATYVF
RNDTGLPTIFWTVRQATGAGGGRDENYHSRHGRAQNPVLEALPGATVPFS
VDQHRHVTHETEGNDAQRDEVRRREYDAVHTLFVRLGGSLDWLELSSLPL
SRVGIYTYPFFPPTLPSYVASSSCASKIVWEVASEEGRRVLTLRSAVRLH
NSTGLPLQVRCVGGKEIDYLYVGPWAVVSLPLSWAGRQGIITLRPTDQQN
SGTSSSSQSSNASYCSENTIKVDVSSEEDQFAWSGALWDEPEAAFGSATT
LRSLLVCPLLFPKSSTCVADSGQEHPLMLHLAAAEHTRQEGDYVVHIYAG
ATLVNLLPVPVRYAWRERLNRREKEAGKARSLTGEIKTGMLASGEEKGLH
FADIVGLGAEVSFKLHGGPAYEALGRTRWVSLGTEEQGKEGDREKYAHEL
EMRDEAGNVFVILAELERRGPNGLRVTLYVDVWVRNKSGLSLVYGEPRRG
RAVETLGGPVTTDVVMSAVQEGEVVEEVFEVRVQGRRQAGRQEVETRWGT
ELGRPLLPKEEWRLPSSRTWAWRDPAWKVDGSGQVSEEEGWESSRLDFPD
AFKPARCFNAKDRIWRRRWLRRRSLVASKDRDVEVSPAEEGGNGVRQGLF
LPGVLPFQPRARSVTSTLSSSATFSSSSLSTPPSHHGQRRSPHTQVSPPT
SRQQQGNDQIIQQLVLKIGDSQWSPPLDVSLEGAGGAFQVIGNRWGAVLE
DSRLCHTLYELAYRVTTLPPPWDRTRLVTIQARYVLRNEGARPVLVGQLG
ARVPPIAPATGKGEAGEQKFMMELVPGESRPLHWPNFRLQSLLVLSFPPS
HFPAISDTLPTEGTARNVRYSSSGGIDIAALSDTPVIIRPSVPSPSFSAS
APLPRLVRVQVALGEEDEEEEDVEAALSISLREIRRPRYALIEGTLGNME
EGEESGRRRGGEEKEEDGEGAPLLWLENRSSVTVWYGQAGGEVEDALPPA
HAQIVGWDHPLPSSWEGHGADGGEGGALADGEGDRMCHLRLSLAPPTSSL
RRTTASTVIVSPGAVGSSRTLEIPASGGASGTRGREGAHSVTVQVVMNGP
AKILRVLDLVPSSSPPPSSTKASSLSSLRHRGHDKTRRSVGTDLQLSPSG
RKEKMRDVLRMRLALPAVILSLVDDTPEEVLVLGLEDVVAQAVKGGGEEG
RGGLRSRLTVGSFQVDNHMARAHFAVVLRPADDEHALLAPHPSSSPSSLS
SRPPSVRFDMHVGPPHPSLFAHIRMLRVNIRRVILNLDQSTVLAVQRMGH
RMKGEGEAGTEAVGKILYLPCQDASRDSPAEVAKLYVPPIQGEVVRQGCG
GSPTPCRNLHEEIQRKKQRKPKQGVKVLVEELRIEPLSVNLSLSRPRESP
EDVYVGLKPNKMLSDMLNRLDEARLNLHPFEVSFLLTPASHLLWLARVHY
AREVKRHVFSMLGSLRALGKPVTLIRGIGKGASDFVSQPIQSLVRSVELL
DPEIFFQGVGRGTDSLLKHTVGGVASSASCVMENVGKQLSCLAFDKEYRL
ARERGREGEAGGGGGGGEGSRGGGGGGRPADVLEGLGLGGKRLMRGLVDG
VTGVVAAPVRGAEREGFRGMVKGMGKGMLGLVVKPVVGLADAASDVLQGV
QGTAGAALTAEALSQLRPKRAVYGEERRLKPYDMADAQAQMLFERVRGRE
GRRKGGKRLLARHEEWYCDYAEIGRSRGGVVVLSTARVLFLNEEGILHYS
LSWREVVLAELQVPTRSEERLGLVLHVQRGVDGGLRRFLVPCETVGHAKA
LKGKVDQGSLSFRSSGGEGGLGGCT
back to top
Synonyms
Publications