Naga_100327g1, gene4832 (gene) Nannochloropsis gaditana

Overview
NameNaga_100327g1
Unique Namegene4832
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:895589..900926 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100327g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:895589..900926 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016301kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G03620NO12G03620Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5003rna5003-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5003rna5003Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5003

>rna5003-protein ID=rna5003-protein|Name=rna5003|organism=Nannochloropsis gaditana|type=polypeptide|length=1569bp
MSLGGAESNRSNRENSVRSRREGASRGRSPTPVPIWSEDALEKAPVDEEE
KDLSEPLPPREEGTPYKGRKDGATTRGRRRVDTSGAQEEGGEVGVVIQSL
HALALGADSSESAHSCTGRERGDGSSSTRTLGDACDESGRRSKDPFRERD
VETHPEISTGLGDSRDGASWNARSSVVHAEPKIPEGIFHVKSASPRRYHN
AGLPQGQDDDSQPVGARLETRGTGPWDREGDMAWGTTPAAVAIRVRPTKA
EASEGEQDSLISWGGLSLLSDRADDAPGSDGKESSFLLHTRRSMETTAST
ASYPVMGRNMAQAQPMSPSEVAGSDRVRRSEVSPVSVIPYTSRNLGNGSR
KGSVSPLPTALSPMERWEEGGREDGALWLASVRLSSSVPHSSLHPLQYPG
DPHSQGHSHGPHTFETPMGGKRRDWGESTRASSASIERLTLRFQSSVAEG
GDQGGGEEGCISALPSHLRYGMHSPPLSQTTPPVPVLEPPEKVRRGSRRL
SLARPARPLHREEDASPPLSPRSPGKEGDSGGAEGGGGRRYLGPGEDDLR
PRSLQSGGCALEADGIRARGRNQGLDGGNGGTHRGSLTLSPPSWPFEGGA
CQRQPEDDAGEKEDEARAAAALRKKRASAAKARRVSMGLAARASLIKQHL
EAWRQGGLPCLAPFPAVEATGGPTKEREQTEGTKMDVASRRAPHQSRASL
CSALGGLSLLGGVASPSEEGGKSGPGEKSLLLSTPAVHRRISEGSREDEE
EGEVEETTMQEGGWDEGRDHEHGLREAWARRSLASFATSIPASEPLSGRE
AHGEDSFMLVDAPPARSLHRTSLVESSDQPPGPLVHGVGLLGKELLATCL
EFLSVQELRGRERSLGSVSRTWAVSLLHAEARIYSSFEKKGSRKGGENGE
KKQAPRHDVVVGWDHIAEKFPCGKFLSEGTYKTVYEVWAKDGERERGGRG
GRVEALSVMDVNAITASGNAAILAQELRASILMSWLVRRGICPNHVETYG
VLRTQHAPREAWECPPAIFHRYVVRAKANAHKGTVAQGSEAFLRHTGGKG
WASLASSTHALPPPPVFPSVPSRSTVAQGDLQLIRMELCRHGDLEKFLRE
RPLGALPPGLTRLLLFQMCFALYAARETYAMRHYDLKLLNFLLADFLAPA
SVASSLPASTFPDKDMPLGSSRVLQERQSHSEDPRSIMEDTWPAGCDKSN
AHRTSKDSRCPAPNVPQKTPPCPGTVGNPATGAVEVRYGLGLHVYRLRFP
PSLPLCVKLADFGTADLAPETFGQPVGLDQFTTLENTPVDFLVLGDGAKQ
DFAADAFSLGLAVWHLFVGRQPYEELMKEVRCPPPLRRALNKAWRGKGYT
VLRKVLEAGEDEEEDEEDWTLHHTFYRYLVLLGLPSEEEQRESTGRARGL
NPVWKAVASCIGPHPVGHGKEDQSTAAPIAFTMSTRKRTTRACVAGTPLP
PSLAASDVTTKERVTRQYWQDHASFSLRHGSHPSVLRGRERLAALPGAFS
LLRALLDYLPQRRPGMYEALTSELFACLREPEEKETGHDARSFLAYYRGE
SLQGGRRNPRTGMPLQVDV
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Synonyms
Publications