Naga_100087g10, gene4781 (gene) Nannochloropsis gaditana

Overview
NameNaga_100087g10
Unique Namegene4781
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:750968..754739 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100087g10
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:750968..754739 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL007ngnoL007Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G03060NO12G03060Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4952rna4952-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4952rna4952Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4952

>rna4952-protein ID=rna4952-protein|Name=rna4952|organism=Nannochloropsis gaditana|type=polypeptide|length=1204bp
MSSASFSLQRPISSLLPLVCLLLLSLLLVTTKAFTCSPALALSESVGPNG
LCECNPGWYGPTCEICTTDQACGILLRDSDGICRNDTFTAIRESFGWCAI
ANEDVTNLIHGDGFVQIYYAANGTFFFDFVKRRGDGDYLSLFRCHSKKTK
VTEDPKLGQVKYSSPDLVCNMTCVIGSDRTCTQGLSGIVDQVGAKGGSKI
TCDPAARTCDVQEATLDLFLGGVQTTGCYMSECARRGETVVVSTGSFANI
ARQPPAQQVSYILGLAMLVATLVILVLASSYSWKSGGFSGSHAGAARLLA
GKMTGNKGGFVAGMAETDQGKHAEGGGLPMASPGAQRLREEEAGVLPGSL
GGAGMAMAAAAGGLGTQGSGVIGGAGLGGKKSKACPVVWDGVTYTVAGKQ
VLKGVSGYALPGELFALMGPSGSGKTTMIDILAMKNKRGQVGGRVYYGNG
LRKAYGEDPGADERVRESVGFVDQEDNLMGTLTVYEAVLFSAFLRLPDRI
SVEGKTERVLQVLQDLRIAHVADSMIGSQGRRGISGGEKRRVVVAMEMVK
VPAVLFLDEPTSGLDSFNAALLVDCLRGLARRNATNVVMTIHQPRSNVFA
GFDRILVLNQGEMTWFGKAKEVDAYYASIGHSIPSHYNPADFLIDVLFTA
EGGEREAGERRNPVATGESKGKWWPLQVFGMKKSLASGLEGAENTRKEVE
LAHGWGKENGAGVGKAGGAPASETAGSRPLASRLAPGPSQSVRVDMGEEG
MEEEGMEGGGMLQDSAFKHNTREEERREREDVGVSPPTSLSGPFLRHHTN
SSSRNSTSLSGAEERPDAAAAHKLEHASEKPSINPFAEAFRRSDAYQALV
VDMASLLGPRGKDGETGLEGEGEGSNSSGSEGTLVTLSPVEHLEEDGSQG
VKGVDPAARASGLGDPSRVSWRARAWKGLRRWCWEIGVLSHRSVLDLARN
PVLFWSHAGATAYFAVILGIVYFDLSMSSLQAIQNRLGAFLLSCVFLCFT
SVSALPLFWLERNLYLHEQSNRFYMASAYFVCKVFFDLIPLRVVPTVLFG
SITYGMIGLRPGFQHFIIYQAFLVLLVCTSALINLIIGMLTRHIMSGILI
ATIVMIHFLMLTNLFVNFDSMSVSWLKFLRRVSFFNYAYEGLSENELVGR
RLENFAISTGSGVLHELGFSTTAMYFDLMSLMIYLLVTLALAFIVLKVCV
REQR
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Synonyms
Publications