Naga_100087g23, gene4770 (gene) Nannochloropsis gaditana

Overview
NameNaga_100087g23
Unique Namegene4770
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:722746..725426 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100087g23
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:722746..725426 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL007ngnoL007Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G02930NO12G02930Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4940rna4940-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4940rna4940Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4940

>rna4940-protein ID=rna4940-protein|Name=rna4940|organism=Nannochloropsis gaditana|type=polypeptide|length=583bp
MYSLLLLALSATSSAALHHAPEQIHIAFGKTPDIVAVQWSTRVLERAEGG
GPEGQQPRSFVYWGKDPTHLDEAAEGLSISFVDGGARKRQQQHHVVNMTG
LEASTRYHYQVGDPAYGGLSRLYSFKTAADAVTLADDLPIRLAIYGDMGV
DKNGSTVVRHLLEHMHGDPDYLDGVLHVGDFAYDMDERDGVQGDLFMRQI
EPVAARLPYMTSMGNHEKAYNFLHYSERFRNMPVSDGEVASANGPPAPNN
WWYSFNIGPVHLVAVSTEIYDFGPYDYIPRQYQWLEKDLKEANANRTLAP
WIIVHGHKPLYCSSPTPAQCDNWYRSQREGIPLRPEASTTAEMRGDGIDA
SRLRGKGRKRKWGLEELFYTYGVDLYFCGHEHNSERLFDVVKGETGRRTR
DMQGTTYIVTGAGGNREGVTPFLSQAPARVASRAEVWGYSILEVHNATHV
YYEQRACDRGEGREGEGRRSGRREVWRSPKVPPRSMGGAWTEGIGGGKGV
PALSVDPGCTERRSLSWFCQRRRACVLASALRSTLPDPYSLLIGAEPRGR
EPHRQPRCRRLRETNFARNNAFLHSIPPHPPPP
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Synonyms
Publications