Naga_100090g11, gene466 (gene) Nannochloropsis gaditana

Overview
NameNaga_100090g11
Unique Namegene466
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1211719..1216408 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100090g11
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1211719..1216408 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0009056catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G04810NO02G04810Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna483rna483-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna483rna483Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna483

>rna483-protein ID=rna483-protein|Name=rna483|organism=Nannochloropsis gaditana|type=polypeptide|length=1401bp
MTLETGMATFTAMGVRRRRKRSSQRIAPVAFPRIDGSFIAAATVMMIAYY
PVITASKNGQGPNTAYIISSSRVAAEWHLRRQTRTTSTSILSSSAGSQHR
PTLSTEPTARKSSCPRHSIMPDDFSSQQHERLASAPSWGKAEDIRPPSAL
ESALWKFPSLALHAHAGLVNLTGSVAGGVVSGFRDVISPAALASAATITG
TVGQVMGTAPMPKGGWGGGSEIQTDEGVEDLSDLYGQDEDNFLQDTDSED
SYAPAHRYDDSAELVVWADGGVYPPPTEPESEAREDSPAMSQLQRDVARI
LGWTTSSSPRAREPALQDQAGRGAEGGPGESQAVGSDVQGGKGRQAVERD
RETIAQVRRIAAGLLGRFLRVGFLTYRLVVAGAVGIVRSPYQRCLRLLHV
LGAAFEGMLVSVVLLGTTASNSMRRILRAPVRGLPSPNVCQRLATSFTRF
LHAHCPGLLAHPIFYGGPFPWQWKLGRSILRRSSSSADGAAGLPPLAVLL
RDLGGAVVSSQGQAGRRRPRDKRQERSQPHLHRHTPLWSLPQHVKDDWSK
STLQIDASSREWADMPVPPPPSPRLDLISPVEENKLPLAVVQEKGDRSLR
KEVRTALKRHEEERAATPSGPPRPTGGSSPSSPTAAKATGSGRNEATATA
TDPARQEETSSYKGPELFTSYFPLELEDFIAEDVARMGSTAGYRVAASTA
AQVGGTSAKEESSRSVSGEEAHVSLGAEKHARTGPSEKTSVSTANRHVSV
DLPANPPFPASTSDGNFDKSKLKELAQKESEADAVRAAGDSAYGRILADL
NTQPMPVTEEVEDAPPGLNFALPYAASIPSLERMDQRMVALAVESALTVQ
SKSQLWRYIEEIGISPLLAAIKKDFENDGGGSVEEADMDDSSHGDSNIAS
PYSLFPSSVSPVAPSPAFPALDDRQAGDTHVLRVEAVEAILHLMEVARDL
RVLRAAFEEGPGLAPVVGVEVVADLIDLIEEPLLLLMPRIIRPRNDELLY
RGQRAAVEVLFQLVLASDKAISLAQKDGRLWNALQQMTADGMYAAGSPTF
ATCHKLLAALGHNEWRPRQPGQRGLRILSFDGGGTRGVLSVALLKQVMKR
VGKDVFETFDVICGTSTGGILAVLFGIERRTVDEAEALYDKLVSKIFASS
PLIQTTKLLLRTSYYDEVVWEQVLQDMLGDNLMIDSMGEGPLSPKVFCAS
LSLKTNPASLYIWRNYAYGPDHEPKHSGSFRVMVRDALRATTAAPTFFSP
LEREDAKYCDGAFLANNPTAVALNEVRTLYPGVPVECVVSIGTGVHVDNR
KADGGYGWEGIVNDLINCATNTEVTHQTLSAFLPKSKYYRFNPQTEFFPL
DETKPERLARMKSIAREYFWQSENKERMNELVHLLKKGTSPLPHLRSSLR
P
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Synonyms
Publications