Naga_100054g11, gene4637 (gene) Nannochloropsis gaditana

Overview
NameNaga_100054g11
Unique Namegene4637
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:399928..405979 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100054g11
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:399928..405979 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G01470NO12G01470Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4801rna4801-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4801rna4801Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4801

>rna4801-protein ID=rna4801-protein|Name=rna4801|organism=Nannochloropsis gaditana|type=polypeptide|length=1479bp
MEGTRRPLNNWGEEQDGKFSPVSSFSYKPQREFRQTDNEDVQDDKYWMEA
PPHHLPLGGQSEMGSGASQGPGVAYLQPSPYEGSTHPLYGQQMGHEKESG
RRHLLDYLDQQQDTQHWAHEQYQQRPPQLESHQAPSHQQHESIQHSRLEM
MHRVNCMQQSQQEADRQTCALKEQHPRRQMNLAGDPHQLQELFSSQLSFQ
EEGHRVTQREADLTGISNDTSAQYLPRYPNNVEPGGKTGLGVGCGPSQQR
AGPARIAATLQSQQLRQYKQGSRHAQQPEDCPAQSFSPSDPCAATLEAQR
LLLEARQRKHLLQQLLALQQQQQLQQQQQQQQQHQPHQQQLSRQHHVHHV
APHSRQQQQQQWQQQQWQHAPQHQSLAQQLQINHWQRQGNQERLQTQVEQ
YAPSHQPFWGSKADRGHETPSVSLQPVLKQLVPHSAERSYSEGDISFFRS
ADSSRFHRPTAIGQHHSQHRIPPSSVPMHHLPIHLRGSKRHFDRGGPPHG
MPHSGTGAPVIPTYNPPPGMLQHGFSQLPSVPPMLHQQHSYPSLVRASPG
VALPPRHQPHAHYLLEAAGASSSLPDMACVPTNLIISKMDAMAIKRAELA
ESPTTRMQFKDFYRQFRIKERLSFEAAKDYAIACFELLPLRVHWKILLEL
ADLAKRENRIAEARRLYRRVCRLQPHAAQAWLVYSRMEEECGDVERADGI
LQKGLLFCEYSESLLARALKHAERKGDLRFARSLLSRLRHVSIDKVWRTV
LEGALLEARAGNNRVARKVFEYLIGCVPWYGPIYNEAFRLEEKCQGHAAA
LAIVERGLKEIPRYGPLWFGAFRLCERLDLDAGKDAVAHGLVPDLPRTRD
MISRALGSISKELIWKVHFEAAQIEERAASTAAGVRVLPRGGPTEGLAGA
SLPVPNLDPTGKLTRVETATAIAAIPAVRGELLGRCRQYYVDAALTAPSN
LRWKVWLAGARTELGAGRVDVARALLRRAFREVPDKSKAHVFLECARLEE
YVGNVEKARSVLAQARVEARGEWKVFLESVLLEMRAGEWVRAIDQARSAL
SVHTGTGRLWAILVQLRYLGGAGEQVRVLRQALSEVPKSGEVWCEGARIH
LSPVSFNFDLELAQRYLDFAIQFTPQYGDSFLELLRLTLVRQVIEPVARS
VIAKWDDDTTSGVEGKGSQVVEAVDCRVLALRCPSFVLAVEKFMTTDTEE
LELRCSNADPNYGLFWFHCRDLPSDSPRLMMRRAKALLAEDLSVLFPLYL
AAILRRHRVEKRVGKRTGSGTVCHTERRQKADADNVKEHRIAEGMRDIEM
TTGKVLQDERGSEKTEEESLEAAMAGLDETANKMKDRKGEEFLSHHKSTD
RLPLCSSNEELGTALIISEERKNDGKLADTNMDSSTFVAVQRKAWRLNKA
RIREEEAIAREWERDIQKAMQAEPRVAPMAWDPEGREIVLKPGDFMTGLV
GLNRMATDTGSLSNEEKRRLLFGSDQLVP
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Synonyms
Publications