Naga_100090g20, gene457 (gene) Nannochloropsis gaditana

Overview
NameNaga_100090g20
Unique Namegene457
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1182409..1188888 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100090g20
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1182409..1188888 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G04680NO02G04680Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna474rna474-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna474rna474Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna474

>rna474-protein ID=rna474-protein|Name=rna474|organism=Nannochloropsis gaditana|type=polypeptide|length=1898bp
MYVDDPASLELKGELARFLKEQMELQTHTHKEATSSASVVFVTAASAAKT
SDLLTPARLSSAKAARGKLLAYLRLFAVGGIPRGGDGRALLLRIFVTFLS
RPDNAVVVATLDCLINAKLPYLTPYATTCKALLKDIHLRDELVRFSLTKD
IQSEHRAEFVPLLIRLLFGRFLAKASRARTRTSKDSPAARRTAIVSFMAG
AQGETEFREFVHLMLRPFLVDATASFDTENNLDVIAASAGRRLGFLHLLS
SVIRQMGFHVLPFVGTFVEVTLRLLGEGYRDASAVHNAREGDEDGENEWH
GVGGDDDDSRDGRDGGQERGDEDEENEVEDGDIQVRRGHTQGSLRLLSTR
VISELFDQYAESFDFTSVAPRLWTVLGPSVSRLPAMCSGARQPPALLDLL
LTLTQHDALLPIYIAFEATLTPTLLACLSSGQAPPATVAGPILSIMERLC
EHDGASHLLSHLPALVKHITERLEKVMAALVRSAGTLRTRTPTRGEKRTE
APSWISAHALLFHGDLACLVRETDAEADFFQNIIHIQVHRRARALQRLTK
LLKESDDETVKLEEAGLENTLILTPALSSSSLVHVLLPLASQPVLSVDRT
IQVKAPDPTLLHESILATAAVARRLSWSHYNGLLRRFLREISLADLTPVG
QSPASRERALVNGLCHVLDVFHFPLTPPSSADQDEKGSTAAVSTVADSKM
GGAMQHGREDKGGGKAEDEAEGVRERSISNSPTDALKKDVIWRAVTTQLL
PSLRGLLLKDSKDKEGGKQKVLRAPMALALLKLIKMLPRTSYEQELTRLF
MSVCGTLRSRDSNVRDAAREVLAKMAQDLGPTYLGMIIKELKGALREGYM
LHIRIFTLHTVLRSLEEVYKPPLDAPSLPVPRASLAAGPSPETSSYGNGS
DSNAHALRPPLDACLTEIVALLTEDLFGEAAGAKEAEAEVKSATIKEAKG
QKALDGLEILSRLLLFRPTYAVACPEDPGALSSVHALVKPFLLQLHDSES
PRMHGRVNEALQRVVAGLSVNPSLKAEEVLLYVYGLISPFVLSEDEDEKE
SGGLDGQEPEAEASESEVDEEDDLQVIGKAAVKATEASKPDLHRPKKEVP
SWLPVDGTLKLAVEAKQVQRMAAREETRVLDGKNAPKLTGWGRHGAKARR
AEGGMFGSPAALAAGVLGLRLLHSYLKRLGQPSEELIPVLDPYVGLLARC
VRRRVNDSIVLLSLKCLALMLRHLSSLPSLTFLTPRLVRSSLSLLSMAGG
PANSRDEIVQSCLRILTILIAASGNSIEDDAPLGPLGLTQPEKRPSLPIP
AKSLGALICLLRAAALDYDHVNAPFALVRALVARRAMVPEMYDLMEQMLG
IAVTSRRPTVRQMGGQIIVSFLLHYPLSSVKVAGFLQQAVRNLDYEYAEG
RMAAFGLLQTLIMKLQVSMLNEHAQVVFFPMVLRLVNDPCPKTRAAAADA
ISALLRRVSGDVFNTLLDYQCRWMRMHVENEGLARAAAQAVGLFVDSRPD
LFKRGGEDGLGMELLVLFSDTLASVEKRGPVPDVQADGLESPHEREGEAA
LGWEMAYHCLGTISRIYARLPGMVESFLHGFPEGMTLLSATSEILCYRHA
WVRLAASRVIGQYLDRRATGGKTRTLITGTQLRSSPFLSDPAHCAALARR
LCVQIDRPSVAPELSLRAVKSLVFLTSAMVHTELELERGGGSPMRADAAL
EGEEEDVGGGESEVGVQEKGDAPKDLLSWIFHRLSYMARRKGEDRRCAVF
QFFAAVTTLEGQAVVERFLPHMLSPLYRATSDGQAEASAHGNDAVELAKE
VTALIEEKAGATAFLKAFSDVQKQATQKRASRKHARAVEAITDPGAAAQR
KLAKNVMKRETIKRKKGKYREIRGGAPPGERAWKRQRSVGEGNKDEGM
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Synonyms
Publications