Naga_100151g3, gene4540 (gene) Nannochloropsis gaditana

Overview
NameNaga_100151g3
Unique Namegene4540
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:116117..120279 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100151g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:116117..120279 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G00410NO12G00410Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4703rna4703-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna4704rna4704-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4703rna4703Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna4704rna4704Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4703

>rna4703-protein ID=rna4703-protein|Name=rna4703|organism=Nannochloropsis gaditana|type=polypeptide|length=541bp
MRTDEIEEFTLREQWWSVGTALHSLLVWEHGGSTGKLPLSSLSLSLQKCP
PLKALRWHPDKNPDNQEQAQAKFQDISQAFEVLSDPEKKKIYDMYGEDGL
KMGGGEAPPEGPGGTGGMGGFPEGFAGFARGGGGGGRGGGRGGGGQFHFG
GFSDPADIFAQFFGTSSAFDADGFSFDDLGGGRGGARQRVRGMGGMGGMG
GVPFGMGPGGFGGPGASPPRSSGPPKKAEPLEYNFNVTLEDLYTGGKQKK
MRITKKIWDAASGKFLHTTVDKEIPIKKGWKNGTKITFEREGDELPGVIP
ADIVFILNTKPHPRFEREGDDLVYAATVTLEQALTGVEVSVQTLDGRVLK
VVKGGRERGRGAVWCMTMYLFSSLARAKHPGGLCRIVGQASKNVEACSPS
VLLGAFQRPGRPFWDWCKCGDVSVCSTPIDCLFFTRSGERTARHPRDRQD
PARGGDASAEDPRKERQLARQVQHRLPHALGDTKARDQAGVERREDVRGT
CRRNLPNLGRWKDMDRDKNWQSILEGACVADGGLRSRDDLS
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protein sequence of rna4704

>rna4704-protein ID=rna4704-protein|Name=rna4704|organism=Nannochloropsis gaditana|type=polypeptide|length=515bp
MGKDYYQVLGVSRGADDKEIKKAYRKEALRWHPDKNPDNQEQAQAKFQDI
SQAFEVLSDPEKKKIYDMYGEDGLKMGGGEAPPEGPGGTGGMGGFPEGFA
GFARGGGGGGRGGGRGGGGQFHFGGFSDPADIFAQFFGTSSAFDADGFSF
DDLGGGRGGARQRVRGMGGMGGMGGVPFGMGPGGFGGPGASPPRSSGPPK
KAEPLEYNFNVTLEDLYTGGKQKKMRITKKIWDAASGKFLHTTVDKEIPI
KKGWKNGTKITFEREGDELPGVIPADIVFILNTKPHPRFEREGDDLVYAA
TVTLEQALTGVEVSVQTLDGRVLKVVKGGRERGRGAVWCMTMYLFSSLAR
AKHPGGLCRIVGQASKNVEACSPSVLLGAFQRPGRPFWDWCKCGDVSVCS
TPIDCLFFTRSGERTARHPRDRQDPARGGDASAEDPRKERQLARQVQHRL
PHALGDTKARDQAGVERREDVRGTCRRNLPNLGRWKDMDRDKNWQSILEG
ACVADGGLRSRDDLS
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Synonyms
Publications