Naga_100151g5, gene4538 (gene) Nannochloropsis gaditana

Overview
NameNaga_100151g5
Unique Namegene4538
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:110391..115269 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100151g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:110391..115269 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006810transport
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005215transporter activity
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4700rna4700-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna4701rna4701-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4700rna4700Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna4701rna4701Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4700

>rna4700-protein ID=rna4700-protein|Name=rna4700|organism=Nannochloropsis gaditana|type=polypeptide|length=985bp
MSTADNGDGPKSVAAMAKALAAQRGEEYVHDLLKGEFYDDGGRITTNAGM
QSEEDHEREIQRTIQMVRSATHALSVRSQGSEQRSMSRMQSLRAVFSSRE
DKEEEAKVPLDDLFDENDVPVTMTRTKTVTSLDSEGLSSALAAELLKKFG
RNELPEKKKPKWLIFLEQLYQPMPLMIWAAIIIEAAIESWPDMGILLGIQ
FMNASLSYYETTKAGDAVAALKASLKPLAYVKRDGKFLSMDAALLVPGDL
VLLGAGGAIPADCVVKDSQIDVDQAALTGESLPVTFFKGDSVKMGSTVVR
GEVEATVEATGANTFFGRTAALLTGGDEVSNLQKLLMRIMIILVVLSMAL
CGIAFGYLLSRGETVRESLSFTVVLLVASIPIAIEIVCTTTLALGSRELA
KDGAIVSRLAAIEDMAGMSILCSDKTGTLTLNKMMIQEETPIYVEGETQY
TALRFAAMASKWNEPARDALDTLVHGAADLKSLADVQQIDYMPFDPTIKR
TEGTIRLPSGETFKVSKGAPHIIMGLLDQTAQASVIEQCEKDVEGLGERG
IRSLAVAKTKGSADGPWELIGLLTFLDPPRPDTKDTIDRARDFGVEVKMI
TGDHLLIAKETARQLGMGTHIENAGKLPKLGEDRKAPANLMDFFSYVEET
SGFAQVFPEHKFLIVEVLRRGGYKTGMTGDGVNDAPALQRADVGVAVQGA
TDAARAAADIVLTKPGLSTIVTAIIVARTVFGRMTSFITYRIAATLQLLI
FFFIAVLTMYPRDFQPESALEEWPAFFHMPVMMLMLITLLNDGTLISIGY
DNVVPNTTPDKWNLKVLFTIAGVLGGVALLSSLLMLWVALNSHNPAGIWA
KAGLAGLTYGQITSMVYLKVSISDFLTLFSSRSGGGFFWTNKPSGILLVA
AGIACSLSTIMANAWPESRPDGVPTIGLARVAPKELSLYVWIYCLLCWFI
QDAAKVGAYALLKRNNIFGINDVVAMKKADPSTAV
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protein sequence of rna4701

>rna4701-protein ID=rna4701-protein|Name=rna4701|organism=Nannochloropsis gaditana|type=polypeptide|length=1083bp
MSQAFSVRVHEADDDEEQHLKGEFYDTEGRISTNVGMQSLEDHNREIQRT
IEAFRSASHTLSVRSLGSEGNSKSQVPNLQSVFDSLQITSQEGKADDRMS
TADNGDGPKSVAAMAKALAAQRGEEYVHDLLKGEFYDDGGRITTNAGMQS
EEDHEREIQRTIQMVRSATHALSVRSQGSEQRSMSRMQSLRAVFSSREDK
EEEAKVPLDDLFDENDVPVTMTRTKTVTSLDSEGLSSALAAELLKKFGRN
ELPEKKKPKWLIFLEQLYQPMPLMIWAAIIIEAAIESWPDMGILLGIQFM
NASLSYYETTKAGDAVAALKASLKPLAYVKRDGKFLSMDAALLVPGDLVL
LGAGGAIPADCVVKDSQIDVDQAALTGESLPVTFFKGDSVKMGSTVVRGE
VEATVEATGANTFFGRTAALLTGGDEVSNLQKLLMRIMIILVVLSMALCG
IAFGYLLSRGETVRESLSFTVVLLVASIPIAIEIVCTTTLALGSRELAKD
GAIVSRLAAIEDMAGMSILCSDKTGTLTLNKMMIQEETPIYVEGETQYTA
LRFAAMASKWNEPARDALDTLVHGAADLKSLADVQQIDYMPFDPTIKRTE
GTIRLPSGETFKVSKGAPHIIMGLLDQTAQASVIEQCEKDVEGLGERGIR
SLAVAKTKGSADGPWELIGLLTFLDPPRPDTKDTIDRARDFGVEVKMITG
DHLLIAKETARQLGMGTHIENAGKLPKLGEDRKAPANLMDFFSYVEETSG
FAQVFPEHKFLIVEVLRRGGYKTGMTGDGVNDAPALQRADVGVAVQGATD
AARAAADIVLTKPGLSTIVTAIIVARTVFGRMTSFITYRIAATLQLLIFF
FIAVLTMYPRDFQPESALEEWPAFFHMPVMMLMLITLLNDGTLISIGYDN
VVPNTTPDKWNLKVLFTIAGVLGGVALLSSLLMLWVALNSHNPAGIWAKA
GLAGLTYGQITSMVYLKVSISDFLTLFSSRSGGGFFWTNKPSGILLVAAG
IACSLSTIMANAWPESRPDGVPTIGLARVAPKELSLYVWIYCLLCWFIQD
AAKVGAYALLKRNNIFGINDVVAMKKADPSTAV
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Synonyms
Publications