Naga_100014g55, gene4416 (gene) Nannochloropsis gaditana

Overview
NameNaga_100014g55
Unique Namegene4416
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:951929..955747 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100014g55
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:951929..955747 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005794Golgi apparatus
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005198structural molecule activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G00680NO06G00680Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4577rna4577-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4577rna4577Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4577

>rna4577-protein ID=rna4577-protein|Name=rna4577|organism=Nannochloropsis gaditana|type=polypeptide|length=1272bp
MLTKFESKSNRVKGLSFHPVRPWIITSLHNGVIQLWDYRMGTLLDRFDEH
DGPVRGVDFHKTQPLIVSGGDDYKVKVWDYKLRRCLFTLLGHLDYIRTVQ
FHNEYPWIVSASDDQTIRVWNWQSRTCISVLTGHNHYVMCAAFHPKEDLI
VSASLDQTVRVWDTTGLRKKTVRGAPGAVDDAANMVSRVNNDLFGGGDVV
VKYVLEGHDRGVNWASFHPTLPLVISGADDRQVKLWRMNDTKAWEVDTLR
GHTNNVSCVIFHPKFELIVSNSEDRSIRVWDISKRLGVQTFRRESDRFWI
LAAHPEQNLLAAGHDSGMIVFKLERERPAYHAEESHMFYVKDKYLRLHEF
ESGRDLPLVSLRRAGVSQSNGLGNVIRTLQYNVFNPAENNVLVLSDTDGG
SYELITFSTEPNGQGDAQDVRRGPGLAAVFIARNRFAVLDKSRQVLIKNF
QNEVTKKMAPPNPNTDSLLFAGVSGRVILRSEDKVTLFEQQSRRVIAELQ
APRIKYIFWNKDGSLVALMGKHSLVVATRNLEQQCAVTETVRIKSGAWDT
YNPRVFIYTTVNHVKYILPSGDSGIVRTLDVPIYLTKCQGQTLHALDREG
KTRTFQIDMTEALFKLALSERRYGEVMRMVRGTKMCGQAIIAYLQQKGFP
EVALHFVKDNKTRFQLALACGNIEVALNTSHELDEDHCWHQLGLEALRQG
NHTVVEAAYQRTKNFERLSFLYLLTGNTTKLRKMLKIAEMRKDTMARFHN
SLYLGEVRERVLILEQTGQLSLAYACALTHGLSEEVERLLPLLEASGVPV
PAGLPIAGAQLLQPPTPIFRTDNWPLLAVTNKSAFESWAGGEGTIPPEDY
SDHKPSGIVTGATMASYGFEDMGGSSGGGGWEDDLDLDEGTGARQDGRGD
QHVGEDSGWGEDELDLGELAAPGGKGASGTGQGDECEKGFAVGDDANADI
YVPPQAGTSCTAHWCENSSHAADHAAAGSFETAMQLLNRQIAAVEFAPMR
PLFTTAFTGAYSSLPCLPLVASLRLPLQRNAQDKDPGTASLPSQANRLPP
LIDDLKNAYKAFHAGKFVEAQALLGGLLSAIPLVVVDSRAESNELKELLD
ICREYKTAIRIKNAIAELSSDQAVRQIELSAYFTHCNLQPAHLLLALRMA
MVSAFKFQNYITAASFAHRLLEMPEMASEKNAELRLKAQKVLQKSEQMAR
NEHAIEYDDRQAFVIDCRTLLPIPRGAPCLKCSYCGSSYTPESKGVLCVT
CGISQVGLETLGLVTSAGSGNL
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Synonyms
Publications