Naga_100014g47, gene4408 (gene) Nannochloropsis gaditana

Overview
NameNaga_100014g47
Unique Namegene4408
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:934479..939682 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100014g47
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:934479..939682 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G00770NO06G00770Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4569rna4569-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4569rna4569Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4569

>rna4569-protein ID=rna4569-protein|Name=rna4569|organism=Nannochloropsis gaditana|type=polypeptide|length=1692bp
MVTAYDLKPIAQKSKETEEDAQDHGTSPHSCLVSYRDVLRPVAPGDDSNI
RIEYTCVHISYQYLVCGSNTGVVDVYRHDGAGGNCRLQKALIPPKGSQHV
NVKVTCIKLDPTQRILAVGNILGAVNVLLLNFDGGQPQRLLHSHVLHQGS
VRCLAWDDLGQRLYSGCDGGTVVEMLLARQDGPSEHGAGGGDSVAGGGRG
GSPGRRSLGPLLGLFQASPSSSVLHQEESDTVQLIFLAVTGPLPSGMQRA
GDIPADGILLASHARRCNVHLLNRTLSRSLLYSIQVEGGGTATSGKSIYG
ATLQPLMDSRGQQLEKLYLYVGRPRDRFWVIDLGSENAVQTLAPLLVPTP
LPADHDPADGEQKDAESARNAPPAGPFGGRLVMTRFPPPGGPCLLSWSHS
GGLALISLERLQTVPIWGGGAYDLAVLPGSGAVLTLAVLRGREKAVGMLN
VSLEPADGTDGRAAERREAAALLQRAWRSQHARQAEKMRLKMERVLGAVR
EVGERARTHLSLPSEQHASQEPSAVPGSDPGAAKLLGEAEALCADVRQFL
ARAAPASEAALGKSALDSTSLKLMAMAEELLLESRRVLSPRDECAASPRI
SEYNSGSVTALPSAMADLRETPVLYGGLGQRWRERQEGEIAGNGKASLSR
IAGVEELEGGGANVGSAISALAALEYEVQLVASGGLGLDLAFVGNGVVVR
GLAFLADGRPSPAQLCGRIRAGDALLAVNGIALEPLALKDKLGVLLALAR
EEDTEILLRFMAKEASSWTRSLVGLGLGGAGGSGGGTAKEERSPSRPGGE
PSSLSFPPSQAPAALMQDQERAIEKILEMGVTLPKHGLSNGADQLRHQQS
LIQHFLTSTLLPWKSKIREEEKSRSTQQKCAIATSEKKRWGEFFRSDMSL
GLVLAAEEMENDLDRIARDVRTLWTTMDRANDSRFYDDQHFGALLSRVQA
LASNPPADLKMSLERCSAHARIKAGGRTPRDIAREYLGLLYFKDLLRTTT
FHSQGKAAITSKKGIEYRAKKDEELEPKESSAALYEASMPESSPCSPIQV
YLEAVPLTDVLAELSDGVRENIEQVGKESQDLEAAMEVLTHVLEATLAEM
VGCAGDKVAAEDFPFLAGGKPWPPVQLTHVTGMAIAVQQAHAILSSSETM
LQEWLRCFQPLPPSQRHMIWDSSDSFLSQHIHPDDAEMIRQHHLLTCELA
TLYFQMHTVWPLLEKSVSTKEQRSEKDDNRDGTEEVRLDIAGGCAVLDGG
GRFDASLGILHVGSRRGEGMPTQWQEEEALAFLEEYGAYVMLEGAVKACL
ARGFELALWYLVRNLGPQEGRFQQAEKALVQRLTANKEDELALVRHVQET
AFPLSLAVAILPEVVASPSFGTPTVVTELHRVFFPHLRPWLIRNILAARG
KEKVKVDPYAGHTFATAALLITRNVDEAWRDYHTTAGLKAITATGQDVGR
TALSPLDDLISPMRCLSTTIAAAKEGNAPPISDEGSGVPRLQAALRQRLE
LLRRAIVAGDLMTRIQTHIWDMGSASSAVAGLNVLPPSLLGIALVENGTR
GPQLSTHTPSKEEGMREPPAFSVGIERDGAKTPSTCAWNPVEGQGGVGIV
HDLAEEYLCGVCQLDCCREVVRSRPTRHRGHEHGTEEVRRLNGDAEGVSG
EGCSGAGDGKSIVFFTCGHAFHSLCLQEKACVVCLRGNFPPL
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Synonyms
Publications