Naga_100072g6, gene4346 (gene) Nannochloropsis gaditana

Overview
NameNaga_100072g6
Unique Namegene4346
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:766646..771224 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100072g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:766646..771224 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G01440NO06G01440Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4504rna4504-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4504rna4504Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4504

>rna4504-protein ID=rna4504-protein|Name=rna4504|organism=Nannochloropsis gaditana|type=polypeptide|length=1460bp
MEASTSSTSLAEFTSSYAAGPTAKRGQKRVFALPSEEQWSWFSLGSVLTE
VRVGATDVFGHRPSCPSAISLTNLVKRGDTCEWGTAGEKTCKKAGDVEDT
GQDSQESEPEGLPRRTLRLMDGKLKRGCVLVLRSCKVCDLVHDLSSKSLV
SLGPWKVMARKVIRPRAELLGRSSPLTMTLSLSVTVRLCINHASPHLCVR
QRRKYVPKLLALCNLLRTSQFRASGSASVPASQQNEHSRLRHEENGRGRL
AQIFEEASRAPQSTPGYAGTGCWQRQQQREQQPLRAPERRHLLSPNGSSS
KQSRASITVLADDLLGLVFSFFDSVALHALGDTCRYMRAATASIVPGLKA
RLFAHQLRDLTWMWQRENASWTARQYPDPAWEALLVEEDASWEGDHADQR
KPEDRRRLMYVNMLTGDLFFDKKEVPLVTDVRGGFLCDEPGLGKTVTALA
LILKTAGRLPGPVEEEGGMEMVMGHNARRWHRRRTAYIVCDTGGMEREGR
RCRSTHRRRDLDPRLLRPSGATLIICPGPLMGHWREQIERHAEGWALGEG
QVFYDHATGMGTGGWRALPPPEPLALYKVVVVTRERLRQEWISGGPTHMI
DSIPPRYAGDLEGTEAEEGDLDNRRLSPLLGVRWLRVLVDEGHSLGSVAI
TNEGLMSKRLEAERRWVMTGTPHRHDAADLASLHALLSFLRQAPYGSSHN
EYWYKLISGRGAGAATSELRRNRLVELLRRIMVRHTKESIPEIPAPHWGV
TRLRMSRLEATTYNTLVSLVHANLVTTDMVGGTHAPGALHPDSMLNPINR
VSANTLLGNLRLACCGGGAQVVSIEQQSIVMTLQLARRLFLEFQEARRRG
RERTAVEEEEDEEAVSVGVARVAAFLNRLRAYVNTPCDACGTFLIILMVT
PCLHLLCCQCMKGKNNLCPACGCTFSVDAFQLLQPGLSVHWHEEDLVVLP
DRVDKPLDEDVANHKGSGNIVNVDTTSSTVSVQSPSSVPYHFDPGPSQIN
YHVTSRFLDTGKKADERGENQVGGKESRGLIGHGTLGAGRGPLTLEKMEP
PPNSTVGRVSHHTDVNEEHFSEKMDGNADDGSWQVVSKAWHMITHLRAYL
ENQSSNPSSPDHSLPLKAVVFSQFRVYLNGLKVALENHGFRVGKFYDKTR
LADLSRFKATFASHGDEGLQVLLIGKEGSHGLDLSLATHVFLMDQIWDEN
LQNQVVSRAYRMGAQASVHVERLVMQDTVEEAMETLATGRLGGPQFEINT
QGDDSDEEQDEDSVPDSDSEAPLPLERHSESDILESSSSSSLSVMGHGSW
EPESYGIQQNLVDRNEFTDVSPVPTTKAMSKRKTSKRGTGSAHFRSGQKS
GRSKLSGCTNSGTGAPDAKKMNILLRSLRVVEVNPSPSAVKLSRAAIITP
VETTSTPETGSGRQNSETVHDARGVLSLADFNFAHGADKIREINSGDTCA
KEPVRRVRFE
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Synonyms
Publications