mcfO, gene4315 (gene) Nannochloropsis gaditana

Overview
NamemcfO
Unique Namegene4315
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:673914..677605 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100025g16
Gene biotypeprotein_coding
GenemcfO
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:673914..677605 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0042221response to chemical
GO:0006810transport
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G01880NO06G01880Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4473rna4473-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4473rna4473Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4473

>rna4473-protein ID=rna4473-protein|Name=rna4473|organism=Nannochloropsis gaditana|type=polypeptide|length=855bp
MSNASQSRILSNKTKPSPLIVGLSPVSAPQLERTPTLFDHLHLEPHEKVN
HKTFQHGVRVPDKSESQRKLIELALHQNSLFTCLDEEQIGKFVKEARLVE
FDPGEVVFVQGEKGYDCFIIDEGEVEIMDALEDGSFDPFLSKGRGEIFGD
GSMIFHRRRSATVKAKQKVRTWVVDDEVFVEKILHSARIKALFDKYASLK
DPSDPNGDAVMTMDDFVRSCNDTSGIDVIKYSQLRSLYRIVRGDQEFVRF
KDFSLFNMFMTRPDPEYDIAFLLFDRNKQGFLTKEDVLHFLSTHVGTAFD
KDCDLMKRFFGPTGKKRVRVDDFSLFFNKLQNEMTQQAFLQMDPDGNGWV
SLEDFYQLLSNFGRRQLPESLVARINATRRGRSVSFFDFLAYQTILNNLP
SLCTTIATAADIKSGPLSKDDFKVACRVLNRRFSRAESDVVFELFDLNGD
GYISPDNCKTVLGASYIKELRAIVGRGGAVTFAPPPGYTVEKYSSRHNAH
IDDAEVVPKTVMERVFQFLQGFSLGAIAGGIGAFAVYPLDLVKTRMQNQR
SGKIMPGAVQYKGNIDCFRQVLAREGILGFYGGLLPQLVGVAPEKAIKLA
VNDLLRDMFTNRDKVTGQDSIYFPLEVLAGCGAGASQVVFTNPLEIVKIR
LQVQGETAQVLVAQGMKAPTASSAWQIVKELGFVGLYRGASACFLRDIPF
SGIYFPAYAAAKRYVAGDADKIQPYHLLIAGAMAGVPAASLTTPADVIKT
RLQVKPRPGEVAYEGMADCVAKIYAAEGITAFFKGAIMRVMRSSPQFGVT
LLAYEGLRSFISPTMEPRPPTNAPISQSDYDAFRKEHLSLMADNVSNLVW
GSEKW
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Synonyms
Publications