Naga_100025g48, gene4287 (gene) Nannochloropsis gaditana

Overview
NameNaga_100025g48
Unique Namegene4287
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:599887..607110 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100025g48
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:599887..607110 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005515protein binding
GO:0003774motor activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G02220NO06G02220Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4443rna4443-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4443rna4443Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4443

>rna4443-protein ID=rna4443-protein|Name=rna4443|organism=Nannochloropsis gaditana|type=polypeptide|length=2285bp
MSSAAPSAAGNEEGICVAIRARPLSSREKIQGQRALWRCLPAHDSITLTG
PDGNPLPDRSPGLSFFTYDKVFSENSSTSDVYHAIGRPIVSSVLQGFNGT
IFAYGQTSSGKTYTMVGDETGGEEGVLHLAARDIFRLISETNDRDFLLRV
SFVEIYNENIRDLLDPETPSLSIREDPRKGVYLEAHESIITDFDSIMTAL
KTGSRHRRVESTAMNERSSRSHTIFRMIVERDGDVDGAVLVATLNLVDLA
GSESVRHTGATGNRAKEGGKINQSLLTLSRVIHALGQDGSVHKGFRDSKL
TRILQPSLSGNAKMAVVCCITAAERYLEETRSTLQFASRAKMVRTRAVVN
EVLDDRAQLKRLKKELQDLKGRQRQLEECEAAGGLGARGGEGGGVDEEQM
HRLEAEKQLMTGKVEELEAVREEQANKIARLKTLILQGGGLLEATAETEG
AETGGKIRRPKRTRETWCPGESGVPLPPGALVKGLRGLAREGRESAECGA
SRGSGASSQRPRTELLQDSEVEEAGARVVAGVSGHEKGVSPMSTEAEWRE
QAAALEEMAQVREVLSVYKRHCQAEAGKEEESEAPSSVLETIKSLVAMGN
QAASRPYPCLYGDMLHKEEEDDQEDATVQLPSLSEMEKLAAVVEDKDQEV
ARLVEERDQLKTVIAEQTKELDAAVTALADVKAAGAQGLGVSLTDDDGDA
TVSLDPEVQGLMTSMAERNAELRELQTALQAAGERDQTYEAEVASLQQQL
ADAITAIAGMMGPEQADALRREHEDAVGNLQARVAELEESHAMAGAEVER
LVAKQTMTVDKAEVAALEASHESAWASLQAQLAEAEESKAAALAEIEAVR
AAQAGMMGEEDLHALRTNHEDALAELQRRVVDVTEQHAAASKEIQNLIAA
QSAMISKEEVQLIQENHERALAEMQRQIAELEEAKGAAMAEVDDLSTARK
TMLDEDEVNCLRLIHEQAIEALRSENKVLEEGKMHAVAEMEKVLAAKRVA
EAQVEELREELSGMEAQREELQRRVEVADAEHAAFEDEKARHESSLCALR
SEIEALREEGRQQMTALQEMVAVLKAQGTEGSAPSCDKNLTDQSSEDEGP
EQGAATVTASLQELVQRLTAANVQLQARATTAEIEARGHAEENAHLKGRL
GKVLRRRVSSLPPLNGAEDGHVQVMRAVRRRQGGGTGASNVESMSPSKQL
NAFAPAEVEEEDVEEAKEAYGLVERMTDMTHEMEQLEEELEGMTEALKGK
EAELSEVKAALECKEEDCKRLTIELETATETAHGAEVKAAQKVEEQTERL
AAELVTARSEIEALKTIQLAFPNDDVTIAMQQPGEDPPAIAAHEEALEEA
SKRLEALTAEVAVVKAQLEEKDGEVEKLRCDAFHYQRQFQQIKEKEVDAD
GKEATVENQNKLQGQLLNEKNARAEAEGQLASAMADLNQTRDDLRRAVER
LRASDELLEETQEAARKERERIENELAVREAEVAALKGEAQELSREIKHA
QESLSQRQTAAQGAEQTDESLRKRLSQIQTQLDLAQSLVDRNEARIKELE
AENCRVIRVAEDDVQKIRGELERATKGQSEATAREAEVQMLQEAQQALTK
KVTLLQAERDDAEQRATAAVDALESLEKDVEASKAAPAGQEGHVGEMERL
REELQKACEQETESRQEVQEQRVRQKRLQNEVAALQDECSRARDELESVR
AELAAATAAQSDQYRAAAAATAEVDMLREKLAQAQNAEDARTLEVQEACA
LAKARTNEFALELEGAQARLAAVEAELETTKATAEKADRSRAELLKELNA
IFEAKFEAESRVAALEDEIHQLKNKVAEAAGAEAKESEIEELRAALAQKE
DDGYRTKRELAELKEAAEAAEEAMGTQQAEVARLQAESRAQDERIRKLDA
ESRAKDERIRKLDAVKLTTDQVEKLRKIKAEHAQFSTTNKMLRKELEALR
QQQEAKTVAPGRSSGQALEAQSHTISDLMATRDSLQEKLHASMAACRKLD
LERLSVQETLRELPLFENDGEAGLGFEDDVPDDLGVAVGVVVEKARLRLL
AKHTGGAHQAEERAMMLKEIETLKVEKDTLKARLEDTEAGVDGAHEAEGV
FREKFAAASEKIKALEESNETAAMKMKEAEMDRQMAAEETARNIRFLEKE
NLELMMELKKLREQTSKLQAELDRGASSSGLICGINALRPIYSQNPNVDA
GLSTSQVSVADVNPLKAETTSSSNISCPLPSSKTLPGKTSLSAADKENVM
AVGQNLLPVKHDETAPPFQSLADDETHDTNQCKQS
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Synonyms
Publications