Naga_100003g40, gene425 (gene) Nannochloropsis gaditana

Overview
NameNaga_100003g40
Unique Namegene425
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1089613..1094421 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100003g40
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1089613..1094421 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G04360NO02G04360Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna441rna441-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna441rna441Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna441

>rna441-protein ID=rna441-protein|Name=rna441|organism=Nannochloropsis gaditana|type=polypeptide|length=1497bp
MPGGARRRQRRRDGGSFWGDFARAGLDYILPVIRDNLSRPAPAACHPGKF
PQSNPFQRQPGRDYNRSNGGSAHRRPPEVGGGTGDESMGRGGSREDVGAP
HEWEDGEEAQEEMRELTALYDGDDDDATDGTDGVNEEYRPARLKGGVPHP
GNVVQSVAMAAAVPPPITYKLGLPRRLVESGALSLLQVEAVLYCMQMHET
RLPTGARAGWMLGDGTGIGKGRILAAIILENLIRGRDRAIWVTASPFLAT
QIRRDARDVGLKTRIWELSDQKLKDNHDLSDLGPGLMICTYRTLLGREAG
GSVTRVNQLLSWVGGDGWDGVLALDEAHRAKNLHAQGGGKPSKTAVVIDA
LQSQLGDARVIYASATIATEPRNMQCLSRLGLWGPGTAFDSSTRFAKAMT
DAGLPGLELLSVNLKLAGKYFARTLGFKGCEFQVVKVPMDPNFAAVYDAC
ARQWMELQQDLRLLVPCGPVWRKRKKRSEKQKRGAMGLNGMEEADGEEGR
RTATTDEEKAKQMIWMLFWATQQRFFRSLYVAAKVPTVIALAQEAIANGY
APVIGLQTTGESQIRVERERTAERRKRAAGLGPVGDSEVQDLEELSQCRG
QMERFLTVHMSDALGPGTAEVRSRHLSWLDRIGPRLPPNPLDQLVEGLGG
AKVVAELTGRQFRRKHGRYEQTATSQRLHEAERTAFQRGAKLAAVISEAA
SVGISLHSDRREPTAHKRRVHFCLELAWGADRVMQQLGRTHRTNAMTGPL
YKFVVTEKVGADIRFISTVARRLQSLGAICHGHEGATTKTMDLREYNVES
KHGNEAYTRLWSVEDPSPRYRKALRILEAVALNRDDDTRKFLNRCLSFEL
EIQHVLMDKFFELFNKVVHAAKMDGTYESQGIINIRGETVEVHGPIKKYK
TSDDVLQLSLPRPSLTETVAAGASHVAPCIVDGGDNHASKAVLANKGLTN
GVCHQDMKRAKSLHEETTMSLVTLTLDRGLRFDRALEMLKGADAGGEGHL
GGNGFYLYPDSVRPFLALDRGGGCSFKIIFPDVGRQAFVDKRPEYLLRAQ
YLRPHEAEIAWTRCYNAALVRCFPHGRQAPSDSVGLRIHKAFMLTFDVIR
HWQLVQKLARRKRLRVVRAAITSKPKKHFMGVMLSEKALRRLEGQGLPVV
DEEGEAAAVEEGFEDKQLDVVTFFEEWERGVKERAMSGMLDGRNGKESVE
EQCKYDEMEVVRTESNTMDGRTAEGHDLEHEEQNVIYLDSDLDSEVLTEN
CGLGEHHGRRMLHGSKEKWSREDPVDSAGASTLDIAHEDDDKMDLLSTES
PCICAQVSSISEASNDDVYARKGSENAFKGIVDLSQGCVLEDGKEDSVGE
SEKSRVYSNVHDHKTVIDVDALDDKGLGRKRGGYEHDSNTAARNSASCEA
CRNGEGFVKIRNPIDLSIETGSSRAGDMEDEDALVMDVLDMLDELKDEDI
ITKQEARGLRARAVNRDALVVEAFYKARECNTAYTGGQVFRKIALGM
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Synonyms
Publications