Naga_100031g12, gene4165 (gene) Nannochloropsis gaditana

Overview
NameNaga_100031g12
Unique Namegene4165
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:289335..298734 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100031g12
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:289335..298734 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000166nucleotide binding
GO:0003700DNA-binding transcription factor activity
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G03670NO06G03670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4322rna4322-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4322rna4322Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4322

>rna4322-protein ID=rna4322-protein|Name=rna4322|organism=Nannochloropsis gaditana|type=polypeptide|length=2018bp
MAFLTQLYRTQEGKNRGPFIIVAPLSLINQWQGEAGTWAPDLNVLVYHGN
TDSRQVLRDYEFHFDEPYIRAEEAHYLKQRNILKFDILLTTYETVIKDIK
ILSRIMWKVLVVDEAHRLKNPASRLFVELRTLPREHCVLLTGTPLQNKTE
ELWALLNFADPVHFGDQAGFSREYGDLKDASQVENLHNMLKPFLLRRIKE
DVEKSLPPKEETIVEVSLTPLQRKFYMAIYDRNTAFLFKESKASMAPSLM
NVMMELRKCCNHAYLNRGVEERILSEIPLPQRTPENLHHQLVSCSGKMVL
LDKLLPRLKKEGHKVLIFSQMVRVLDLVEDYMRYVGHSYERLDGTKKATE
RSAAVVRFNNPALNRFVMLLSTRAGGLGLNLTAADTVIIYDSDWNPHNDL
QAQARAHRIGQTKAVKVYRLLTRKSYEIEMFHAASMKLGLDRAVLAHQRA
EGEMEANSGAAGRIDGVGPSDSASSLLKPSKAQLGFSHMEVEHLLKRGAY
DVFRGDDAEGQEFQEADIDQILKRQSHKVVYGNQDSLTKNLASSFSKASF
VSVDNKKDIDLDDPDFWKKAIGLAEPAQDAIKATSGLATSAILGEGEKRK
RKRNERFDPKTLAGLEESLEGYDSAFEGQSFEDDSGGEAASQSGSSEAQP
RRRGRPRKGEIVRVRGRTRRRGKSEGNEATVGNGRFSVGPDGRVISGTGV
DGSNASTSPTTQLRRAPKWGPHSRDRLIRALLEFGFGRWKRIRSESLASD
VPLGEVESFCRSYVLQCGLCAGEGKRARQESKFVKDAIAAATKLAAQMKS
GEIVIPEVLQDERFLSRLRQGMARKALVRLDLLLRLQTPIMNDAVRLAYM
ALSPKALTAKGLPDNLSEHPEQLVSRMPNFEDRFQNLGREEVAAHILLGE
VRPSWTQVTPWWDLECDKHLLLGVYMHGFQNYNAIRDDPNLCFRRKMEAW
LVDNPKGFMLETKPPPLASNAKEQSLSRDFTWSPLQIFLRLPRRLAQAKE
NESSEAGNGGDAGAKEEGETSEEAACREYFRAVTLPGKRVSGYRGVYAQP
GSVHWVVQIQQLTGTQCVGYFASEKKAALAYDAAARRLYGPDADTNFTSE
ADASSVAASTASTTQLQPRASSSDPAASPLSPAAAVQGGEASSDSPPMIA
SSASMISVDSVDKEEEVLRRRPEVTKLPDHELPLSWHRSSRYRGVRAAGP
KWTAQISYNGQNHHLGTFNSELEAALAYDALSRRYHVGQMAVLNFPDGPE
EELNRIDALMEELTAKKLPGGWPQGGAEEAAAVAATTIALEQAKLEKVTG
RNEKENRATEEEENAAIEEVVVSNEQKEGGQISRMEEEGVKSMKEEMPVE
GTAEGATCDGDRVGKKEVKLEDVQSQGAEKEEESNDVRMKSSAEEETGAA
AVKGALSDMKAEKPEGSAAGTAPVVPERAAENVSKEGLSVEKMEASECEK
TFARPDGTKASASREADYGEEKPEKGIGERSKPAVIGRATPEVDGPEDEA
KEKKDEEKVGENDLQETDKAREEASQDGSLAVGESMKKKVETAELDGTAV
KATGDQALESMIKKFWPDGYKILSKLVTWLIDDPEARLSHSDLKLQTSGE
GFRVDASGRPIKRRPSEEDERGFGGANTGDPIHKKMKPSPGSLRGSGAWS
TEECRRLCNALLMSGAPLSSPPLPVTLFLATAGKLSESVLVGRTSPSAAH
SVDQVIGHLPTFTWEDVRVRANLPNKAPEELQAFYVTQLLPLFQKLCTHR
EPLPEAGEGLSTIPDPTKGVLEHTAGSRSIAYTFMRRQQLIRAVRYILEK
KPRRLVEYLGSAEGKAAGRSLPGWWQGTRHDVALMLGSWWKGLLCIDHIR
RETKLGLCDAAIFAHLKKAVNEKATATDRPQPSEAELQDYSERALAAFPD
RKTLEERLHRICIVIARNVPAGADLRTMGARAKSPSSDFSGGLTTVLPVP
GHEKEGSEGKENGGVLNEGVETKIVRESPGGTTTLTSPTSVVTATPSPKG
HEAMGAVGTSISSAPGEL
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Synonyms
Publications