Naga_100031g15, gene4162 (gene) Nannochloropsis gaditana

Overview
NameNaga_100031g15
Unique Namegene4162
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:281446..287445 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100031g15
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:281446..287445 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0016043cellular component organization
GO:0007049cell cycle
Vocabulary: Molecular Function
TermDefinition
GO:0003682chromatin binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G03690NO06G03690Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4319rna4319-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4319rna4319Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4319

>rna4319-protein ID=rna4319-protein|Name=rna4319|organism=Nannochloropsis gaditana|type=polypeptide|length=1792bp
MGEGAEGGNGGGEAGHSKGKRGTGSSKKDGSKGRGQGGKGSRKPGGKRRR
RSSLGVSFEERAYLRPLLRQLVRLLPKVQEAVDLVEALILSIRVDDPVLL
ALGPLCASILAVDPGAGGGGLGPAQTLALLQPIQTSSISLLQSIFGRYEK
HRSLILEDILGLYSKLPGGKRPIRAFRLHYRAATLGTEGQSIQMTSALVI
LLVQAVVVRPQALLEGRGKGGKEGGTEEREETWIFDGTGDGQDAGGLEGE
AGILAVAHQFAGAFLDRCARKEGGTEFRQLLQHLVDDLLLAFLLPEWPGA
ELLLQALCTRLLRDLYHQQGRQQGGREAGKTDSIYFLQCLDLLGRMLSKL
RELWVVMEGSEGLGVGKDDGVAGGGEDAGRVVSEAVEKELSKAVIEEETS
REEGVRVTEWFRRVMQDKMDKAGARNTLGRGLGLSLELEHERSEKLEEEG
KEGRGQNGQERDEKQSLEADTRADGMKGRVAGEKGRKRKRGGSPGVTGSK
TEAVSGKEGGKCGRPSQQESKATQAQGDGIEEGVEAEGTRVEVEMEEDAE
EELAEEGALSSSTLTDLDVTRQLILNYLTHKARRGESWLKFSRHCFLSRW
VAESADASPSALTLEGEEDGQNDLVSGHARMPAGEERRHPSYWCFLASQW
EMPPAAVVHGEADLYHVLPTEAVVHLNHALAVSRPLLQSLGLLLFRLLAL
LGQGQAAWRARVMKAFGNILESDPLLMLDAQVKQAVVDRFQDEATSVRQA
TVELVGKYVLQQPSLFDSYYQPLLERIVDKGVSVRKTAVKLLGEFLQRCP
THPLRTEICRRLVGRASMVKEEDTVKDLVQDSFQAMWFSVGVSSEASAGE
GGKEDEVEGDGSDGHVADEEIGWKLKKLSEEERLTAVGLQMVEVIAGVAN
TDWLVALLTGLLFGPNEGGQGKKERGRQRKVVAQQCGRVVEVLVNLLLEL
DEGNQPPLGSKLPELATPAKQLLAVIATLHVFSRADPRFLLPHVDTLLPY
LKGENHLEAAEEAALCCKVAQMVGLVLPHLSHPDRAVYAQVGRDLVLITY
QFGAATIHAAVQCLANLCICVQGGDPGLILGLANTFYRVLLKFREKPSFA
PQEADYTTRSSTHRALVVLGCVCRYYPGFFPPSGAAEGALPLAMLDEPLA
EELTCENAFVMSYRLLSLYLTKDLSTETKAVQALCLLFTGCMPLMLTAQR
DHVVGRMLTPRGGVARAPVRLQALKSLREVLLAEETRVESGAARARMMQA
GVSVRQRVKGDQDAEASIVGGVIQEHLDSIKHLLFDRDDQLRTAALGILS
VLHRQGLVNPLQTLPALVALQADPFSAIRAHAYRQLLIEHEKHPEFLPAR
ILEGVSLSYTFQRRILSGRARGGTGELISAVVSSGGGEGGWEGRQSFLGP
VYSTCLRQNRKHRYSFLRNLLALFEEKTARDVHAKANRQMLQKQQESQQQ
EPHPHRHGNTARHTSIGVPTAAADPKGQKGSLDPHFLAYVAQLLAYLPFD
VQEEPLFLVHSISRTVSLQGLTLLGEMKALLTALGKDRKGKAVGNAAWKG
ATTLGCCDEDEDDDYGGMDEVKNGEGARGTSGYLGVSVPTGSPSRATMLA
QLKDKAGTAMSLCLLLHLKHWLKNVYVLSDERCQEVRSLGGQGGGMAGGN
AKTERPLSKPEGLPDLPLPAHLLASYPTSVAHGREGEKEEEEEVLAVLEG
QYREFALLVRQDPSDFVLTQAPPRGGGGRGGRGGEGGGRRGARGGGRRGN
SMGNAGGGKTGGRRQGRGGGGARWRDYEGESDSEDEGSAGSQ
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Synonyms
Publications