Naga_100031g25, gene4152 (gene) Nannochloropsis gaditana

Overview
NameNaga_100031g25
Unique Namegene4152
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:249737..256702 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100031g25
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:249737..256702 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003723RNA binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G03800NO06G03800Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4309rna4309-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna4308rna4308-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4309rna4309Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna4308rna4308Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4309

>rna4309-protein ID=rna4309-protein|Name=rna4309|organism=Nannochloropsis gaditana|type=polypeptide|length=1279bp
MLSEPTETPSPPTLSSSSSFFMFGASVTKFVTGGRSNVARSKGSTEDCDM
GGPSLSNNPSSTTPAALSLDAGNSDAPPSSMSGAQLRGFTAPDAASQSEP
ASLPSRGSQKNLEEMIGSSLAYAINSLDNLVLHPSRAMASLTGLGGGGGS
SKDEGKAVGASGGAGHGGSNTDSTTSSCSSAGNGVGVQFSTTGVAATPGA
SSPADSTSGATSGTSSPADPTLNSPENNPHLYLNPHMQTHSRIEHAPHPV
GPSQSSLEPSAYQLHQLQQQRLQQIQSLQRQQQESSTAGNQSSAAALLAA
SSQQMVIPGNMTALAPHFLQPQQHKHPIPNPHHARLPVPPPLPQQQQQAA
LRQQQQQQLVSSKSGEGKVDSPVLSRDPSMQNTSGGHLHSISHNDSHQHH
YQLQKPARPFHQSAGTPNPASNSQNTPPPYPYQHNQLQLNQQQQHLGVKK
SQECANLEHSGAAGVGAGRNRASLFETLVGVELCHFLLETESRALILFNV
EHVSAEHLTRVCENLGTLAYLRMDFRANRGVVFLAYHDLRASLRAFHILP
RELGAMSQYDTALCPSGRPPSPLAPTPSVHYSIMLNAATTPRDGILLVRE
ASPSSSPSHSLPFTESDVQAVFSSYGQLKNVHRRILLSSSPSSSNTSSYH
TVTPPSGSLPLPPGNGLAFLVEFYDVQDAKAAASELASTTPWGASVQVEE
AERAAKERQLGQQLLLTLHRWREEGRAAQLSAALVSPLSGTGGGREGLGG
EEGLETLLPSSASSIGTLYTGNASSHGHGSFYGGSPLGSGATTAGTTLSS
SLSPSHLLFLQHSAAYPGHTPSPSSAGFMMHGGERGTSVGKNKGAQSSNG
NNVDRNNTSDVGHIGKSACENHYNGYNNHSASANFAGTMHNNINKKNNNV
NIHNINNNHNVTNTNVMSNSLHAVQNLASGAGGAGRSSVYGHSPSGTQSA
TPTSVGYGSSSPFGGMHSSASSSSTASALGVYLPGMQHHHQQLAMSQMQL
EGVPPSSSLDPHGMSSGGMNGNDAATAAAAAAFKGLWVSPPHNMCSPPLM
PGMGPSVHGKNRLSPNTGAQYSRIMTATASTGRYPPPFGGGTNGMMGGGS
GGGDTEFHLDVERILMGMDRRTTIMVRNVPNKYSQQLLLNEINAAHKGKY
DFFYLPIDFKNKCNVGYAFINFIEPKAIVPFFKEFNGQRWRNFNSEKVCA
ISYARIQGKQSMISRFSNSSLMEKDGEYRPLLFYSSGPDRGKPEPFPSSL
KHHGRKSGTNTPTTPTFLGMAGLGGMGMM
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protein sequence of rna4308

>rna4308-protein ID=rna4308-protein|Name=rna4308|organism=Nannochloropsis gaditana|type=polypeptide|length=1279bp
MLSEPTETPSPPTLSSSSSFFMFGASVTKFVTGGRSNVARSKGSTEDCDM
GGPSLSNNPSSTTPAALSLDAGNSDAPPSSMSGAQLRGFTAPDAASQSEP
ASLPSRGSQKNLEEMIGSSLAYAINSLDNLVLHPSRAMASLTGLGGGGGS
SKDEGKAVGASGGAGHGGSNTDSTTSSCSSAGNGVGVQFSTTGVAATPGA
SSPADSTSGATSGTSSPADPTLNSPENNPHLYLNPHMQTHSRIEHAPHPV
GPSQSSLEPSAYQLHQLQQQRLQQIQSLQRQQQESSTAGNQSSAAALLAA
SSQQMVIPGNMTALAPHFLQPQQHKHPIPNPHHARLPVPPPLPQQQQQAA
LRQQQQQQLVSSKSGEGKVDSPVLSRDPSMQNTSGGHLHSISHNDSHQHH
YQLQKPARPFHQSAGTPNPASNSQNTPPPYPYQHNQLQLNQQQQHLGVKK
SQECANLEHSGAAGVGAGRNRASLFETLVGVELCHFLLETESRALILFNV
EHVSAEHLTRVCENLGTLAYLRMDFRANRGVVFLAYHDLRASLRAFHILP
RELGAMSQYDTALCPSGRPPSPLAPTPSVHYSIMLNAATTPRDGILLVRE
ASPSSSPSHSLPFTESDVQAVFSSYGQLKNVHRRILLSSSPSSSNTSSYH
TVTPPSGSLPLPPGNGLAFLVEFYDVQDAKAAASELASTTPWGASVQVEE
AERAAKERQLGQQLLLTLHRWREEGRAAQLSAALVSPLSGTGGGREGLGG
EEGLETLLPSSASSIGTLYTGNASSHGHGSFYGGSPLGSGATTAGTTLSS
SLSPSHLLFLQHSAAYPGHTPSPSSAGFMMHGGERGTSVGKNKGAQSSNG
NNVDRNNTSDVGHIGKSACENHYNGYNNHSASANFAGTMHNNINKKNNNV
NIHNINNNHNVTNTNVMSNSLHAVQNLASGAGGAGRSSVYGHSPSGTQSA
TPTSVGYGSSSPFGGMHSSASSSSTASALGVYLPGMQHHHQQLAMSQMQL
EGVPPSSSLDPHGMSSGGMNGNDAATAAAAAAFKGLWVSPPHNMCSPPLM
PGMGPSVHGKNRLSPNTGAQYSRIMTATASTGRYPPPFGGGTNGMMGGGS
GGGDTEFHLDVERILMGMDRRTTIMVRNVPNKYSQQLLLNEINAAHKGKY
DFFYLPIDFKNKCNVGYAFINFIEPKAIVPFFKEFNGQRWRNFNSEKVCA
ISYARIQGKQSMISRFSNSSLMEKDGEYRPLLFYSSGPDRGKPEPFPSSL
KHHGRKSGTNTPTTPTFLGMAGLGGMGMM
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Synonyms
Publications