Naga_100003g57, gene409 (gene) Nannochloropsis gaditana

Overview
NameNaga_100003g57
Unique Namegene409
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1054739..1059130 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100003g57
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1054739..1059130 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G04190NO02G04190Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna425rna425-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna425rna425Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna425

>rna425-protein ID=rna425-protein|Name=rna425|organism=Nannochloropsis gaditana|type=polypeptide|length=1463bp
MGPGGGRLAYKPLEAQPPCFKGGNWHDYQLIGINFLRNAWHAGNNVILAD
EMGLGKTIQTLGFLRCLAVEQRLARAGGSGGEREGKFLPFLVVCPLAVVD
NWERECSVWCPDLDVVVYKGSQRSREMIQRYEARPIRATMGVEGNGSTSR
ARKKRKLGDGRAQGGDGEPPGGEGGTKEGAGGDHVEEGEVKALGGKVWSN
ALSQLSKHASAALKRRRCGNSEERRLDVKFHVMITSFEYAWKDAFFFKKL
RWEAVVVDEGHRLKGGVTGRLYQALKEMRVGHRVLLTGTPLQNSIEELFN
LLHFLEPGKFADVETFKAEFASMDKEEQLAKLHDLIAPHMLRRLKKDVNL
AIPEKHELIVRVELTPVQKNYYKLILAQNFELLRRKFKAASSIYNMIMQL
KKVCNHPFLMQEEDLCYPVDQDYSARAQALLSSSGKLELLDRMLLKLKAG
GHRVLLFSQMTTMLDLLEEHVMNRGWRYQRLDGSTRATERQARIDAFNRR
SLNHKAKEGKEGDDYFIFLLSTRAGGLGINLTSADTVIIYDLDWNPHNDL
QALARAHRIGQTRKVMVYRLITRDSVEERTLQLAKKKLLLEHVVVGEAGR
GRNMTQEELDDVLKYGTEELFAEEEGEKARNGEEETECANAKKWGDGGTS
KSSKRILWDEEAVDRLLDRDGEEEGRGERLESGTEAVDGEEAGEERKTGK
GLSGLFQSFKVARFASVEDVEAEAAAVRAAAAAEAEGNEDKVEELRRERE
AALLRDALPDNTEKSWVELLGSRQESLKAEEVARLGKGKRERREVVRPAG
TYQGPLSEFLSGSDDGGEEEEEQGEEDYEYESDEKDEDAEYDVRSRRQST
AAATSQAGPARVLVPGFGESQRRAIRGYLMRFGLTKCGDFKSFYEDLSTH
AAGRLAERSAEEVRHYLRCLLAGGSTREGSVRALCAVESDLLQRVAVMGL
IDEKVREFEAQDPESFFIDDGRQTAWCKACVITTKAFKLTWGRAQDLLLL
ELTLRHGYGRWTAFLQDEDFIASVPPRALVHLSHSQGPAPAISTGGMEEE
GEHAMRKVPAPEGGNEAEAHTGTRERSAMNENSSRYEATTPEARRKAYTS
GQERQLLAIIGKRMKLMSQALVIEKQRLQRKIRALARVQEHVSKLVSHEN
YAGKPFPPLELRALLERRRSVHCAIQELFDRLRQDPRLLGSMEVLVLEQR
LDEHQGRLCALTQKNRDLLLKAENARSKMILGSSYLEDLNRQASELEAVT
RSVQESMQNVTSGYMEMEGALSKHYGPKTASRQSETTVLEATRGMSPRLA
GKEESELKEKQKLQVPAQEEGKAISLEQGHGGNAGQSLPMVQEETIGSQP
IQSISASEHQVPQQHNEVPALKKLPPSSVAQDIPQSDPAKYIHGRLADQG
MAVAAPKEKSGNNANFCDDNSEQQAVDGRKMQGCEEVKANSNDCEAVDCG
NGVERHGIEGKMP
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Synonyms
Publications