Naga_100084g22, gene3962 (gene) Nannochloropsis gaditana

Overview
NameNaga_100084g22
Unique Namegene3962
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:900099..904898 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100084g22
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:900099..904898 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00830NO08G00830Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4117rna4117-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4117rna4117Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4117

>rna4117-protein ID=rna4117-protein|Name=rna4117|organism=Nannochloropsis gaditana|type=polypeptide|length=1224bp
MASDSEDKENMVRSVLQKDMEIEEEEEEEEEEEEGEEVGNTEKRGRKRAG
KKQAAHGKAARPTKRHSSGDGDLRLHREDEALGDKTGGTGGMDEEKRAAK
EEQDGVGLGMESDSEEDEDPETTRQLGSMEAGKRYAVLNPMGRPAETGVI
VKIYCENFMCHRKLSINLCPNVNFIHGQNGSGKSAILAALQICLGARANV
THRGARLSDMIRQGHDGHAIVRVSLLNKGPDAYEYDKYGDYITVERRIER
HASGCGYRLLRGEPFKGGSGHLQLVSKKKEDLDRLLDLFNIQIENPCALL
DQENAKKFIQGDGSEKYRFFERATDIERLQAQLSKPKEVLRNTEEILRQH
EENLPRLKSQYKELQKLVDSMEGLEQKEEEIKHLKVQLVWSEAQDKEKER
QEAGKAVARNERQVIKIKEALVKAEEMREGQGQRAVELEKKVTELKERTK
DAKRTMQDLKMQLSRRRLPIATLEKRVAVKTEEIKKYLAKKKVKKKEMEE
EQERLTAQSEADLGPLVQERKELEDALAGTETRRAALEVEQEQTLAEMEE
VKKAGDVARFDVMNAQGAVKRVEKELHCLGRDGAGGNNPVAVYGEAVMGV
VREIQRQKKRFREVPVGPIGLHVKVKDGAQEWAGPVENAIAGMLSGFIVT
SHEDRRVLQDVMRNVRQADNLSVYTVTPGLPRHVLQTSRGSNVLNGVPFH
MVADCVTVDNDYVWNCLVDWAKMDGSAVTQTTAGAKQMAASQGRFPAPIK
VVYDMTDYLTEFKNKSCIQRFVSNKGRRRLGMDSSAARLNLQRDLASAKA
EAARVVGAAQQLDEQGQRLQTRLQQIRAEIRKMEGEVNALEDRIRTVKYH
INDASQAKEAAMDLEAVQREIDAYDEQVRDLQTQQSQDKAEKQRLEEDVK
PLMDREADEAKRSKALEVEVAAEQALISECLGQLEEADVRVKKCQAGLLK
AQAEGKDLQEGLVTATTLAEEAIKGVRLYTRNALGEDWNGEDVIPSGTWE
QLTKKLKEKERRLVAARAQHQTRDSVATVRLKMVNAYEAYVEKKRQIEAQ
RKNLDRLEQGLDKRKRNLRSFRKYIVRRATIAFDTVLQHKGSAGKLDFKN
RVLEMEMRTNAMDESSVSKNVKELSGGERSFTTLAFLIALGDAIESPFRI
MDEFDIFMDAVARKTALDLLVKTATREDMQHRQFIFITPQDLGHVRDKVS
NTFKIHKLLPPERSMGVIQQTTLT
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Synonyms
Publications