Naga_100001g2, gene3954 (gene) Nannochloropsis gaditana

Overview
NameNaga_100001g2
Unique Namegene3954
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:875688..879047 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:875688..879047 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00930NO08G00930Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4110rna4110-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4110rna4110Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4110

>rna4110-protein ID=rna4110-protein|Name=rna4110|organism=Nannochloropsis gaditana|type=polypeptide|length=849bp
MESIKGWDTRVFDEKKENLVFFACVWCTAKMEDTTIYQQTGGCQPEDVLA
TAVVAGDLEDTSPTESNHSTTQTGTKQRTHAPHTHKYRHLSFPHSQSLEC
ISQTESTLGKVGVRSNLTSTEVECSRPYSFHHPPETSTNTQRPYKSGSLS
NGSAITPESLTLAYLELLRRASHPSESEASTPPCDSEDLGVPVPADESRR
HMGANGSPKKSLLMKALWTAATGMGSTTSAPPPGATTPEKADASTDDEAD
EDEEEEEARIIPACVEEGPVFDEKRGSYLALLSTSLWRTQQALAGSRLVR
RCYPRKWVEEPHLLRVWEGRKRGVVESRGPLGDTSREDQDTGAVGRGGEE
AWAQSPWREAKGLAGASIPILSRVQACSRELAGTAWVRGREGRSVRKVLV
VLFLLLGLGLWARQGPLPLRAWATVVPKEEGWEGGAGSGARGWSREGKNA
PEVVAWTMPSSEEPGVPPGDWDGRTQADDEFGVGGSGEEGEEKKGGGSGE
SEVLLQGKAGQVDEGGSLVEIESLASRTADERAGAKAAAPSRTDGKVKSE
GRGHGHAKDGTRDGGRGEEVCVSEGNPIPALLEFAPALPADTSAPGPHGS
APSSPFPLPVSDPHPTLPDEAKQVVRAVPPSRGQSPRREGVGLSGAAGLG
GWGAGRGELTRLYDRGFMAEDLSLMEVVAVFGLEYAHHLLRRHRDDLRAW
GQGWCLPGHAWRGGSCKPNAVVRVALCVWDVARAKARQVHDLAFEWGAVA
AQQVQLSLPAPPGPAEAEAVALAAGAWMRRWQKAVTASLVCTIKRSSTFL
QGCNADSYLVCRSRVCISIDKIGTGKMSSSDDIESRPRRSSLLVRTMCA
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Synonyms
Publications