Naga_100001g4, gene3952 (gene) Nannochloropsis gaditana

Overview
NameNaga_100001g4
Unique Namegene3952
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:868810..873084 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:868810..873084 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00950NO08G00950Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4108rna4108-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4108rna4108Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4108

>rna4108-protein ID=rna4108-protein|Name=rna4108|organism=Nannochloropsis gaditana|type=polypeptide|length=1008bp
MSRTRPRTAPAAASSSIYGSIDEHASTGMRGSDGKAREPGEERPRSTGRK
PRKKRKGGITSEEWLQGVLYGLINASICLPASISFSTIIFQHEAFAPYLP
VLVRLVLLSSAVHATVFVALSSMPFAVGQVQDAGLIFLSSMASILADYCR
KHQLSDAVLLSTTLVLLSLATATVGLCLIGIGRLRLASIVTYVPMAAVSG
YLAFIGLFAFNAGLSFMTETQLDSVADWGDLGTREDLFKIAPGILLGIGM
FVALRYVHHVLTLPATLGLSVVVFYLVLFFRGLDLSQAQSMGWVAPPVPP
TPFYEAWELLDVRLVRWETVPLLVPSWVALTLVVAFSSSLDVTAIEMEKK
QPLEYDYELQMIGLSNLVSGLTGGFTGSYIFSQTIFNLRRGITTRVCSAT
IASIEFLAFLLPVSLIAFVPRFFFGGLLVLIGTDLMLEWLWMSRKKMMAP
EYAVTVATFLAIQVTNIEVGMGVGVVLAMVAFTVSYAEAPVVLHPRVRHS
SVVRTFEERAILSANTDKIITLSLRGYVFFGSAVKILNEIKENVLAGHAM
SRRQQARVSEQERNEMEVEEHRGSTTDRSHSRTSSSSLSAALAAAEFRGD
GTKSHVGNQRSELVDFYLREWSENDRHVEFGQADCRSCSRGRIDRDSRMA
TVAPSLPCPPPSSARKVSFSSSPAQASGSTVPQNRIRWLIFDFSQVVGID
ATAARSCFLMLKSLLKGAHIRLIFASPGPVIERLLRGHGVLDEEDSVFDS
VDEALEYCEEELLQSAAELSDADLLGLSRHPSFYAAVRRSRRLSRRAPKC
SRRDKLLFEAQKALDLESILADYLEVAVEEGIDTDDGEEGADAKVNHQPH
RVLAQYFEEASFQPGECLFAGGEASDKLYFIRKGVIELRAPTISDNRGLG
QWQQQRLQKISAGGTVGELGFFLKRPQIFTAMATTPCVVYCLTRPRLVEL
AKDNSKLACVLIFAVIKSIALASSYAISDFADVTLLLKCRQDQGDLRTPV
AIKGTGKN
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Synonyms
Publications