Naga_100001g8, gene3949 (gene) Nannochloropsis gaditana

Overview
NameNaga_100001g8
Unique Namegene3949
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:859430..864077 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g8
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:859430..864077 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00990NO08G00990Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4105rna4105-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna4104rna4104-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4105rna4105Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna4104rna4104Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4105

>rna4105-protein ID=rna4105-protein|Name=rna4105|organism=Nannochloropsis gaditana|type=polypeptide|length=853bp
MARDVISSPLFSAYSTRDNTPVDPPITPCSSSSSCVSFFPSSPSALSVRP
SPRRRPLTLARFLRRFWRHEITGVLLGVTFGFVVASAFLFLGRSMKMDVT
NVTSRLRSLTALSPTLEPVLPRGHVPLENIQEAEFVGRVYIGSPPRPYTV
VFDTGSANLWVLSKAGSHVASGKGLYVHDRSSTYQPNGRNMSIKYGSGFV
QGFYSNDCIRAGGLVVPQMAFGEATLAMDNEHGTLFSGMQGEGILGLAFQ
GISEHAVPTFIDLLYQQKQIEHKIFSFYLTRNVRRHGSRMILGGVDMSFA
REKEFQYVPLVEEGFWAVGMAGMELKKGEYKGLREAGLGSVRRKGERDNE
AIVAEPMRMMTTGASSRNVSLGNPTQVHTAARADNGSLVLCGGGASCLAI
VDTGTSFLGVPAKTLPVMLEYITQGQRNCKVQKGKLTVCDCDRSMSGFPD
IEIRLHADPPVSFSRRQGFKEGRRKGGKEGGEVVTLRLAPEDYLLQFYSD
FRYRCAIGLQAVHSSLMGKDDDVYILGTTVLKTYYTVFDGEAMRVGFAYT
AEEKQPLSWTGPAFATLYRLVTLALYMVILVCLVQIFQSSREEDVDGPEV
GVQDKEEGEEEEGQVDEEGDKTEAGKVETEERSTPRSSFLSRVWRPSASS
RWSWVGNGEGGRDGAHGTGCMSRPLMQGAPEIAPPNGTTPRGHAPHGDSS
RTATAGRERSGEGEGGRDGRGYPGGWAVSPSLSPWKGGDRRSIGQETGQL
LRWWWSGSAEGESDPTGGWQVGRQRQEKARPTDRQERHGHVSPFLEGRSS
PTCGSHVGGMAGWRAGAVDEGVLMGESGHGYSHLASPHNSPTRRKRGGGT
KTL
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protein sequence of rna4104

>rna4104-protein ID=rna4104-protein|Name=rna4104|organism=Nannochloropsis gaditana|type=polypeptide|length=759bp
MKMDVTNVTSRLRSLTALSPTLEPVLPRGHVPLENIQEAEFVGRVYIGSP
PRPYTVVFDTGSANLWVLSKAGSHVASGKGLYVHDRSSTYQPNGRNMSIK
YGSGFVQGFYSNDCIRAGGLVVPQMAFGEATLAMDNEHGTLFSGMQGEGI
LGLAFQGISEHAVPTFIDLLYQQKQIEHKIFSFYLTRNVRRHGSRMILGG
VDMSFAREKEFQYVPLVEEGFWAVGMAGMELKKGEYKGLREAGLGSVRRK
GERDNEAIVAEPMRMMTTGASSRNVSLGNPTQVHTAARADNGSLVLCGGG
ASCLAIVDTGTSFLGVPAKTLPVMLEYITQGQRNCKVQKGKLTVCDCDRS
MSGFPDIEIRLHADPPVSFSRRQGFKEGRRKGGKEGGEVVTLRLAPEDYL
LQFYSDFRYRCAIGLQAVHSSLMGKDDDVYILGTTVLKTYYTVFDGEAMR
VGFAYTAEEKQPLSWTGPAFATLYRLVTLALYMVILVCLVQIFQSSREED
VDGPEVGVQDKEEGEEEEGQVDEEGDKTEAGKVETEERSTPRSSFLSRVW
RPSASSRWSWVGNGEGGRDGAHGTGCMSRPLMQGAPEIAPPNGTTPRGHA
PHGDSSRTATAGRERSGEGEGGRDGRGYPGGWAVSPSLSPWKGGDRRSIG
QETGQLLRWWWSGSAEGESDPTGGWQVGRQRQEKARPTDRQERHGHVSPF
LEGRSSPTCGSHVGGMAGWRAGAVDEGVLMGESGHGYSHLASPHNSPTRR
KRGGGTKTL
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Synonyms
Publications