Naga_100001g37, gene3921 (gene) Nannochloropsis gaditana

Overview
NameNaga_100001g37
Unique Namegene3921
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:793337..798458 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g37
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:793337..798458 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G01330NO08G01330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4075rna4075-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4075rna4075Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4075

>rna4075-protein ID=rna4075-protein|Name=rna4075|organism=Nannochloropsis gaditana|type=polypeptide|length=1665bp
MQRCFVRHHYGVKLLLRRTAKVSSCPGLSRGWHVSSPATLPPPLGTNQRA
YFSSTPLALGGTPPHAPETNLDALEVLKKQKNAVSSLAWLRSIRSALSPE
AYYKVLEISREACDAHSALGVLSLMKSQGQHLDVKACTIAIEVCARAGDI
DNAERVLSEMKASGLKCSPVNYHHIIHACRRQRNGTKALHMLDHMAIDGL
APDRKAYVHVLGACGAQSLMSEAETLLHRITNEDLKGSVEVDQELCSSLV
VGAAENGRRKGWAGSWRAWEVVREHRTGLTAIAFKALRSSLTRTGQYERL
LDLCRDLQGALDSSGRSQGLSTASQSAEDVATTGIEACLHLEDHAELKKC
VQKRLRQGAFHAIVYQEALSAWLALGRWDEMLRLYRDGQEGEAWEDDYLL
LSIMATGAARLSKTPMKDSVPFLMNMERRGWIAGMSESPSLPASSISPFA
RSLLARDWNTSPRQRQTGEKVASGGSLRHDYESKPVHAIVALEMLRRADS
RRWQESLQVLRRLCECAGRLEAKGVGVSALERAMPAFERVISAAVKAGNL
EAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGK
GRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSMTPPRA
PAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTYITLLS
AWQAMARGYGRSEDEESHITGHVPHASPRLKKDVDSDEVWLQTLALFKDL
ENAEGGAPNLMAFNIMMDIGCKTGHVDDARSLVLPAMKRHACEPDRVTYN
TLAQGYLRGRRYEEALKICRESRVGPVNLGWDSHTYGVMLKALAGLKKDD
EMKGLFWERINALREGKANERASQRTGLPDSDGRHFQDSKRSGIQKLLEE
ILSAMVYVGRVDDGVLLIRELENQISGPQKKNALYLLGADSFERSVQFCK
STRDLEGALRLLEELERRGERPSAAACFAVMRLCSIKQAWQTGLDVVERV
AQCPELSRAMGRDLHTARVSFCAHLNDIAGCRVALREMRKEGFLPDEKVY
GWALKCEATRPRNVGGVGELLVQAKEDGVMLTPDVLKAQMATLRQSGNWR
GAVQLLDRMVALREQQLQNEEQDGQASQRVVRGTDADYGPQISQVTEIST
HIFNDVLATLAQGKEWYQILELQGNMLEKHGVVPDNVSFLYRLQALSETK
DWKQALAVLDEIRIGAHGPPVFAQDSMYTVILSGGALDRQPKEIEGLVMR
WEEDSRPYTRHFLNALIGAYGRGGQLAKAVDTFNKIPTHLNGAEPDIVAF
NALLVAQRLAATPLDEGALPLYRELLSRAPSGLAPDGWTYTSLIVACEAK
GAWPVAMYLYDDSAFTLPRAGGAPAAASRASEGEGLEDVVKDAHFKAAED
ARGLGWKDPSRTEVHSVWEKSETGTWMGVDVTAGAEYRHPIAGARDAKSN
SARFESLKTLMSCLEKLNIGLFIEKLYRDAYQQGVFSPWSQTEGNGRVMD
LHHFSCPLATVAIRYALLEFESEQLEQRRLPWGKRKKSMSPWVIIVGQGL
KRKSGSGALKKEVLRIFAGLDPPLQADVDKRNTGRLIVPASRIKAYTTAR
IERGKHTCTREALGAHTLLHKILGNECVHYSQNNLSPSCFGARGLFILLA
ACQKGSLLKGHPECT
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Synonyms
Publications