Naga_100001g59, gene3900 (gene) Nannochloropsis gaditana

Overview
NameNaga_100001g59
Unique Namegene3900
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:719661..725668 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g59
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:719661..725668 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G01570NO08G01570Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4054rna4054-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4054rna4054Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4054

>rna4054-protein ID=rna4054-protein|Name=rna4054|organism=Nannochloropsis gaditana|type=polypeptide|length=1891bp
MKTYRSRKDWGRSQLSPQQHGKDEGMAVSTPASSFPLPNNSDDELDESVF
TGGLARSKRSFFQHQSSRESSPFVSVHSVMADYASSAVGEGFSDRGLPVD
RTLGGEGRQGEGEDAEEQTYTMASPLSHLKSHLCKSEKNEDIDLDENEQE
DGIALETVSGTQANTLTGEGEDGDEKDGGSTRSNTTHFEGPGTESILSPS
AEKIAIPRSEEEAEERDRMKERALEAQRLMAGLGSDDEEEREEDLRVAGS
KSVAGRDEDMPSPREDRCASRGQEDTMDVEDLKGDTSPELPSVSLPHTRK
EKEGRQNSESQKSFTAECETLVDANRPDSCSTAAAQSRSSLPSPAPLPSD
SGPSIQESEGLQERKAIAVVRREGDTPRSGSGSEAEDVPGPGRERRRRPL
SKKEKRDKGKRRAKKSQKAGHGQEETVTRKHEHKTKSHGSSAGAEMFSGA
SLDDVSGPNEHIDADASPPAVPLGIELAPSPPSSPSDANDKTQRPSPLSV
VGGAVSEERNEAVSGLDLGILDSSQSEAEDEKGGVNFARKKGGRKPGASR
GDESSDYEASSSGEDSEGDEEGEGGNGDGRNKKDDAIFKDAVDDGMDPIE
KARLAVRVEELKELKKMEEQALVQKEQRELVLAGQKEMAKRTERLQSQLL
DRIRARNRPLMEGVLMSATEQLKSLVRQKREEREAARASKLVEEAPGAAA
AAAGASVEEEEVEEGFVEPPPEPTLTERLRQKEQEKAAVASSPEPNPASE
REVSTEDDDSGDESGIELELVPAVVHADNNASESVKQSETKAPASWPRHD
HGPRGFLCSRRSIAPDPSHMQLHVSTSLKKTAGPYDKEAALRRQLQEAAR
QRSAQWLARELGYKDYREHQRDLKIMELKRKAMAQRLKEKETAAAAAKAA
KLLEDGVEGDTEGQASGDEEEGSDYAPDQDSDSDVSSEASVDTLEYRQRN
GEEGDRATLGVDADEEERAAAAVLRQKRREEEEEEEEVGQEKENDVEHSD
GDQEDNGDGGDGKGNEGENCAVEKPGETYEDHRAALLSPSAMEARSPGTP
LSPSRRLAFPDRSKEALHGRAEDMTGRPAAHEGATDDRVGEAPPALDDST
SPPPSDESLQFSSVSAMVMSLPPPFTSAPTLADPMSSSKPYVDNDGQLKA
STVQKGLTAFFGKPSAGNGSGATASCQPHGPDSISSPPKKGIAAFFSSKT
TGPSTSSVLASLQQRTAVGAEGAEKGKEALKGRSDHTEDKDASDRASGVD
ESEERAAEPDDEEQDEETGEPRDRAAAYRAMIEADRRNAKRQKKLRKKGL
VELEAEEEEEEEVLKGLEDFGFGAVNDLGGDGGAAAAAKRREENEDVVVR
EDDFEGIVDEVSEGEGDDDAFHDFAAQKEVEADKEQLQEVMRRVKEGFDG
RRGGINFGARGRLRLDQLVGADRKSRREAKRLGLLNSDEELSSEDEGDDG
EGGEEGEEDEEEDLEEQLIRAQRERVMGMRALETSAQYFMSSDDEDEDGE
EKGAGESAAGAGEAAELEEERQERLRAKAWVRKAKMRRVLEEMEEQQLMQ
ESQDGESIPGNGGEGAGKSGSGVVTTSRNAGVAAAKIRRVLQEADADSQH
VMGLLERTHSTRMAASQSLKRLMDMREKDFSADIVDFQRLDPDHAMSNMS
FALPPSKVPRTMSSTLPEREIGPLRVRGVASCGSGSRAEAGTERKENFGS
KPDAKDLIPKSKTNYGSKQESGNGASNTTAGVPCLFSQIREMQAAGMTAP
GMRKGSFISALRRQGSICVPPSNAGQGASVGIGGSSSSNSNGGRLQVSHV
TAQKFVFTSSFLGGAEDSQSRGGYTEPSGSSQHGFSQSAGLEGSSSRHSI
PRERNLSAGGRDKGVEGNCAKRSDKKTRALWKGLIRRQFNK
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Synonyms
Publications