Naga_100001g67, gene3892 (gene) Nannochloropsis gaditana

Overview
NameNaga_100001g67
Unique Namegene3892
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:699160..704993 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g67
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:699160..704993 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G01640NO08G01640Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4046rna4046-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4046rna4046Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4046

>rna4046-protein ID=rna4046-protein|Name=rna4046|organism=Nannochloropsis gaditana|type=polypeptide|length=1850bp
MLLGSGGRRQGEGRWPVLVVGTIVTDEAERICHKNGLLFHELLSAFSVAD
SAVPFRSVSHTVQLHDFRVSFVQASEMAARPQALTEARLAEALTLREGTP
EAESAWLSFEEEESGAVVNVRERDDIGDALAVHDDRMPWYRRFRASLRQS
LHYVEPEMLRCPAALLVVVSSSDQTPIDRFKELSLPCHLPAAFQTGQFGS
QDVPIVYLLLHDEWEGNERGNGLVCAAELLRQMKSELPTAPSKLLRLNSL
PPHSLNLNQAAIWRLPSEVDEPSADSFFLNDPNDPRQRHPVLGGDGARGA
CLSSEDLLNLRELALELTEKIVIPAVERRVFTLQTTVTQSRKGVKNFVRS
LWRKPREAVASTNEQQPQDGATSRSGPSSAASLVASCSPALYRFDRIESQ
IRLLADSLFVMQDYEAALGHYKLVRDDFKADKAWMHLGSVYEMIALCYHH
LSHSTVGNEGSHSAGGPSSHSGGDGRYRREMEGAIEDALKAYFRQVEEEE
HASDHLTGPGNGPKDPGSRAGSLAARMATRASLLGTEYLLAASPPKAVDA
ATLLVNAARKETPLCAAVLLEQAAWAFLHGGNMRKFAFYMNMAGRAFLAC
EAPYPPLKRQAIRCYASTLGLYQDSSWRYILEDIHSTLGRELLKLGQPER
GLYHLLRLLMRGGAFSPQLPGRSGLSPQEQKGLVRELLQACRIRPRVLAW
VIPRLECGLKTFVAALHRAGPREQPPDEAHSHEEQALSSVMVAGLQVPLV
LEETLRVVQGNEEPLGREVEEMKRELERELKTAAVMGEKGGSMREWVRAL
GRVAKEEARAAAFLAGGHRDDASRAGRGICWRGRDEPITVSVDVANPLDF
PITLTDMQITASFEDEAPPFQPPRPPSFTASAAPGIQPLSVEAVSVALAP
SERKCLHLRIHPRRCGILRVTGLRWRLLGELWGSLVFQSPGPLLQGTLQQ
RASRARGPDVRLVSRVVPELPLLEVEWEGLPETVFQGEMVQAALRITNRG
LAPAAHVYAKSSLPSWVFMQDPAMVSTVGGRAGPAMGAGVCMSMVGVSGT
VFRVVTGALPAGGGCVRIPVWVRGLGGGKQRLRILVRYERQRIEGVQTTA
EDGKNGGLGSMLGENYRFAEVSKELCVLPSIAVTPSVSPSYSRPGECVLS
LNVSNYRTDGRAVDRQVELHSVMALSRLWTLKPLEGFSALPEDSKGAAGN
LVVDWQERTTLHYRLAPVEKEGEPMVFEHNLHTGALQVSSPPSPNPPSLP
PPQAPGLAGSSWTSLDFLYVENASQSYRTAREEARRREAASASSVSSSTA
SEETGGRRERLPLSLGEIKRKEAEKRAREAAVLADRRAADSSTVGSTPST
PAPDPSSPTARSRSPMLGMGMEGSGHGGHLAALVPRGRATINLLLTWRLA
TTVYTPQSPAAQAEAASSRTMDSGDILPCQRVCRGQHQILNHAVRPLTLD
PTTAAPLTITVDAPSQVWGCLGPEGLLHKCQVDVLVTVHNRMTDMPVDFV
FEALGAPSGKRQSANKAAASPSFLWVGNTSRGIKRMAPGASVQLPLRAIF
LRPGVYDLNRFRFVAHMPASSPQIVAGVVGSRLKLLHGNTVRVPYIFSAQ
YLIKVSAAPPPPSDVPAPLTAAGAPTASQSSRVNTGFLVRGGEREYEGER
PGIRGEDGGLGRDVSSILHSRSGIASVGGDDDPKRPEALVTLVEQARGGR
KVGREGEEQRELVADAAPPPLLPGPGAEEAMEDVDSLNTPLDRSLAGGRE
EGEAVERETRGGTSNAGFSPSVPVRLVASPSWEGTGPGGLGEGAEAGEEG
EVEVAEDQTFSAEGQERARQKLELEEAGEVGEEEVKEGGGDGLEAAAGGP
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Synonyms
Publications