Naga_100001g100, gene3864 (gene) Nannochloropsis gaditana

Overview
NameNaga_100001g100
Unique Namegene3864
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:633499..638213 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g100
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:633499..638213 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G01930NO08G01930Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4016rna4016-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4016rna4016Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4016

>rna4016-protein ID=rna4016-protein|Name=rna4016|organism=Nannochloropsis gaditana|type=polypeptide|length=1504bp
MRSRVLSLSGAHECRETQAVKCSVRPHLLPLLLLQLERFTGSAWRHLPKL
GRVRPVMTDIDAGRVKAAQEATLRDEALVMRVASEVAQALKLPGKNVTLG
RKLVRLGLTHADSVDGFCAEALQLAPISSSLLQEVHHTLRQRYRQAYATA
GEQAGETAAKQITGVGRTMDGFVMSPSKHLPGGSQQASKEEKPVFFKPQT
KDNASPVERKSMLGLDRLAAMKRAEKETTKDTWSGGKPVVKKEEREGEEG
GKGGPRPEDAARRKSDFHRSSTKAADRSYRPRREPDTPSHPGGVNVEARR
GLEERERGRGRGGGVAVGERGRGRVEDRDGRSNGDRKRDGKGVYLSGRGE
EERSRRRGRDREEEERQRRRSEGRPRENGRRDREGRGSRSRSRSPGYTWK
RHRGERRERGSSRSEREAQEGSEGGRSRRREAEGGGGPSGRWGEYGPPTP
SRSGLGLDEDEWEAPENLQSVRRPSLTPGATPLASPRATPRASLYGRPSD
DPGEAAWEVEERREGRRGDRGTGSESIRPAVPETPFDWRAAMREDGREAA
YVADGRKPGGPDARPGSSLRQRQRGRKEEDEEDEEYYEAFYLAEEGVSRG
EDLFGGDPATLREKEEAMRKLQERNEANKRRQQQNTRKNQLAADQNAWEE
NRLLTSGVAVRNEVDTDLADEEETRVRLNVHHTKPPFIDGRVTFSRQLTT
VSVVKEPTSDMAILSKKGSALVRERRERRERGKMRQRFWELGGSRMGQAM
GLKEEGEEAKEGGAGASGEGPGKEEEEYDYRKESKFSEHLKDMKKEGQSD
FSRSKSMAEQRQYLPISTVRDELLTVIRENPIVIIVGETGSGKTTQMTQY
LHEEGFTDLGMVACTQPRRVAATTVAMRVADEMGVELGEEVGYSIRFDDC
TSDKTLIKYMTDGILLRESLREPDLDSYAAIVMDEAHERSLNTDVLFGML
RKVAQRRRDLKLIVTSATLDSKRFSDFFGGVPVFEIPGRTFPVERVYAKT
SVEDYVDAAVKQALAIHLSHPPGDILVFMTGQEDIETVCEVIAERMMDLG
TDRVPPLLLLPLFSNLSSDQQSKAFEATEKAVRKCVVSTNIAETSVTVDG
VKYVIDCGFSKLKVYNPSIGMDSLLVTPVAQANSDQRAGRAGRTGPGHCY
RLYTERQYRDELLKTQVPEIQRTNLANVVLLLKSLGVTDLKEFDFMDPPP
QENLQNSMYQLWILGALDNTGQLTTLGRKMAEFPIDPPLAKMLIVSHDLR
CSEEVLIVVSMLSAPPVFFRPKDRAEESDAKREKFFVPESDHLTHLNVYL
QWKKNRYSAPWCTEHFLHAKSLKKAREIHGQLSDIMQSQRMPLHAAGNSN
WDRVRKAICSAYFYNSALMKGLGDYRNLLTGIPCHVHPTSALAGLGYTPD
YVTYHELVMTSKSFMQCITAIEPEWLAELGPAFFSLHESSTNRMARRREE
KELKDSMEAEMQAALKREEEEKAARKAAQVKETPKHVGSRMQTPGRWTPR
RVGL
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Synonyms
Publications