Naga_100001g139, gene3829 (gene) Nannochloropsis gaditana

Overview
NameNaga_100001g139
Unique Namegene3829
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:548997..554916 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g139
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:548997..554916 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G02330NO08G02330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3981rna3981-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3981rna3981Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3981

>rna3981-protein ID=rna3981-protein|Name=rna3981|organism=Nannochloropsis gaditana|type=polypeptide|length=1954bp
MKGATLGYTSHSRKSGDGSGKTSSKLMKEAGSWVADGEEAADVISTREKV
VREARKRGTPKDVESVAIELLAREQHEACWLRQEKASLLAQLERARRKAG
HLQSQLSGSMQESQSKKLLDSRLLSRRLSLRDTDEAKSVVDLIRAIHSYG
AESAAGGLPPAEGSTVALDQVQAREGRRNLNRALRCLVMDNFCHVNTCIA
EVVKFTDRQYQRESALNDQDAGLEPLNMQMVFVEGESLIFRVMGMRLQPR
DVYSLCSLEEDLPDAGWGLKTLLAVSDIPVIISTPFQLRLDSAERGPRGV
LCPEWVASLDAETPQGEAIIPPSYRARIKDNCTFIYAPLRESAKELLRSA
DMEPFEGLALAFLERARKLDMMLVSYEGPAEVKVVRNIQHEVELRPTCVP
EEGKATGATRLAALKSSVRLVAHRVADCVVRCSKSTRIPDRNHQEDGQSG
TSLYRLHEFQIALESSEGHGTPARTQIALAFPLGADGFPITEDIRRRKHH
GNVHTEFIYCQMPVPCAGKLPFALQADFDMTSDTLGLHPTSSWNRWLLSC
SVHLFVIATIADPTLCEAVDRYTPRIEEMPKGGLWSGLWELLDRLLQRHV
RVRTESGLMVSRAQAVLRPPSLSSAFISDALLQEVTGGRKHFVDAATLDA
STVKGDAQGEGRVCDLDIVLECVARLVAKSQWGRDASTLQQLWRFVAEQM
AEDRKDVTPTSRRLLRTLPLYPVRGRGMRAFEGATPLFFGLDRKVRVALD
TCGPHVRAEVAPELDFDCLRGSRGAEYTDLLKHAIQAIGIKEAKIEDLQS
VLRRLLTQKQVLHPPSTPNEISNQGPVSMVNSDMFWALRSLVVEGMGYAS
LQEFVGNKSLSVPVLRLQSDGALGRRTTDLNVADASIGRFVTPCFLGVSL
TRTPEDAVALLKTAASWTQDLDNHHVGDLLSAPTSATKSWGMMLQWEDCV
RRELKVDGGTNRRWQGFFQNIISPQTLVDEAMKGLVSPTTTLADRQAFSG
LLQLYKERYPLVFQEVRAAHRVSSARFLEILQDPLFSQNAQKFLKLSQGI
LDACLELVVDAKYDVSTHFRKELMALLPMPETEECPEICQLQDLVYYNKV
DVDSPHTVALVMHVLTRQLVQHGHLVDFEPQDFPSSATHETLKVSPPGQA
LKITKKGSEKWAFLLKALFWKALENMTRSYHQVGSSGDTKQSGRNVVSQE
GELVLLEDYCRHYGVWAASLGALCNGAPACYPLRYAVWTLEDPISSLVVE
SAHAKNMSVTVIALDKEIGDSLGPDQDGSSDIVHRLFVDTLGVSEGRIRK
RYLLMLQEALERWSHVAGPMPRDVEALYRALAVAAGLAHSSSASQVDPDG
TPETRIRTKNAAVCFEFSTIPVLDMNFKVTSLTVLSAGAAAVAAASEDFL
SGRVLHMRPNGGGASNLCVLGNGNIAKAGPQPLVGVAASGDSDDSALDWF
YRDFFPSRCLHPAIFSLLKQLDPVLLPRLAIAKPRPSFLESYGDTTSTMV
SVLRAMKLDVVNAARLLCEVYAGSSLPHTELARYWANVIELRDLVLAELW
KAEGQDRNEELIETVRTSLRLPLCAKTQPPGHGAGGSRDRRAPVPMANAL
QRAENQYPIYLGSLLGIDLEVSDKHHEQISGMVKHPGTTRESSWHRASRA
EDGFTKVEESCYWERFLLALGVVPLTEAQLPLIPTQVLNKVFLALAKFNG
LLNSTEPTVASKYNIWHTYHVLYRAVDGNMYLTRYKGLRSATAPGTENCG
GQSFHHTALTGTGTVTTSAHKQQQHPQQVNEEPQSQSQQQHQQQQQQQQQ
TTATSQAATNGTFSYYGTSALPSVSPYLPTSSYPFSVASSSYGTGTAPRP
PPVELHTGFAPPPVKRQRSPACSHAPTQHNSKTQIASIRPKPLVWCLQCP
PSLHHRSNRRRERSRRVRSKTDRILFAFDWLLITDRKVYEHSFNHTKEKT
RIRL
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Synonyms
Publications