Naga_100001g187, gene3787 (gene) Nannochloropsis gaditana

Overview
NameNaga_100001g187
Unique Namegene3787
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:451843..455590 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g187
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:451843..455590 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G02790NO08G02790Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3936rna3936-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3936rna3936Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3936

>rna3936-protein ID=rna3936-protein|Name=rna3936|organism=Nannochloropsis gaditana|type=polypeptide|length=1206bp
MHTDAEESFSLASLGRALSRRLGSHRTEADSEHRHVVVGDEETTHAKLQN
EPWRPGPPHTGPGISTNEVVTSMYTIYSFVPQNLWRQMHRAANVYFLFIS
ILQTIKAVSITSGVPTTALPLSFVLFVTAVKDAIEDFNRHRADAVENNRT
SYLLTQEKGWDLHHAHPRKWQDIKVGDVVVIKNRDPIPADIILLSSAEPS
GLAFVMTANLDGETNLKAKEVHKDFRNLSLSAKLDGAEVVCDLPNNSLEH
FEGLYSFQKDTGEQKIPLTARNILLRGCVLRNTTWAVGVVVYTGRESKIQ
MNAAETRQKVGSVRRFVDRETVMVLGLQVTCCLVAAILGGLAVKRGAQTP
YLWEGRELPDPALSGLIQFFTYTVIFSNMLPISLLVTLDMVKFFQGVFMT
WDLRMYHQLEDAEGQPVEIPCLARSSDLNEELGVIEHVFSDKTGTLTCNV
MEFSKCSIGGVRYGLGLTQIGRAFRERNNLTIVEPPPRDPTEAITPFVNI
NDPALVAVMKNERDPQHAKCLDFWLALALNHDVMPERHGHSLVYSGSSPD
ETALVYAAKHHGFFFTAREPGKVTVRIKGRAVEFNVLHVLEFTSDRKKSS
VVLRREDGVIVLYCKGADNVIKSRLSESLNSREELAQIDADVAQYADDGL
RTLLLAKAELQESQYREWEKRYHEAETSFKDRDEKRYALMEELERELVVM
GVTAIEDKLQDGVPETIHSLRCAGIKVWVLTGDKVDTAINIAHSCQLLST
EMRLLRLCGEDGELPLDKEKVPFKTGMEEKLRALIQVATTTETSYFAKNL
VPSQQALVIDTYALSAILKYELQDLMLVLCRSCVSVICARVSPRQKAMVV
EMVKKADPRAQTLSIGDGANDVPMLQAAHVGVGIFGLEGQQAVNNSDYSI
GQFRFLRNLLFVHGRFNYRRIATIVKYIFYKSAVLVLPQFFYGTVSLFSG
QPIYEDIIYQLANVLFTATPIIALGVLDRDVPVDSALSIPALYRDGIERR
FLNRSVFVAWMMEAIVHAILILFLPLLSFGYFNILPSGKAVSIWELGTIV
FLSFLTVVSLRLAVEVLEWQIVITSLILLSIALWWMSWVVLNFWLAVAPD
IYGSISVFPESSRFWFTYLLATTACFAITFAVESGSVVFAPTRSQVLRER
LHALDSVDRERKGKGRASGDRKDTAEGSHVPDTSRGKSMAANIPVEQSQE
EGHMSG
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Synonyms
Publications