Naga_100001g217, gene3762 (gene) Nannochloropsis gaditana

Overview
NameNaga_100001g217
Unique Namegene3762
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:391240..395248 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g217
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:391240..395248 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03100NO08G03100Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3910rna3910-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3910rna3910Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3910

>rna3910-protein ID=rna3910-protein|Name=rna3910|organism=Nannochloropsis gaditana|type=polypeptide|length=1062bp
MDTPATEEGEGRQPKPPATLTLQECGGGREGQVRTDAADGGCEGPVSPSP
PLPLEGPAAELLDDLDPRNRGHENGEGGLHGPIGKSSGDGSQAGHAYAPQ
VAPPPTTSVPHPAPAFPTSSTDAAPALRSQPQPGASRQQQEESHEQSPSD
EYLIAPFARSEPRQGQAPPFQDPRPPAPSAHHHEPFQTSALVYQQQSQHQ
SALQEPPTGRGGASTHNSHALLQLQQQLHARSAQAAAAAATQQQQQQERV
AYLQQQQPLHRLSPFQQTPSQAEQDTLSRRQPRPPAPQHLPASTTAAPPK
DPQAFQQYRAHSIPQHQPQPSSHHQPFHPSQHPQEQQRALQPEHDPLSLA
PPADRYNASLPHGRFPPPSHVVAAARAHSSGVNGTYGGVNVDRRVASMDS
SHGGSGSNIYISVPSRAMPSSVSGGVRDSRENWTYGVHQPYAQHSNLQPA
RSNGRGPSGYQDAESANPILEAQGGRDFGQRGGAGYQGGGAGGDRVLGMK
RGLSSRYEDGGDSDREDDRKRRWMTKEQARACQQKFEEWNGSLRGKQEEV
AQFAKGIGLSALQVEKRFHYIRKHYDKVTKRLTTEESSRGRGFELLNSGG
GGIFGMCTGSTQIALISRVNEWAQHELDSDRMMKMLIHLASTVRHKETDE
VLVRPSRHQITKLEGCKFFDGGVPPHLVVEPASTAAFVDVLQELDLVWLG
RRTNPEPFALFMLDSGLANSVSSVTKWVDVRLRGHHLPCFTIVPKGRMKP
VKTQIGVPWMQALMTSVPGMGTTRLISEENLEYVLSSDSQVLGNLMGLDA
LELLYTLSECLVLPQAPPGMLIADSAGGGGSGHQTVPLIAPLEHPRQAIC
PETQQSQQSHQQPQIQLQRGQLQQLSHQQQTQPYQQQQQPPQQAYLHQRQ
QPPPPQSQAPQPQPQPQQAHRHQQQEQQQQQQPQQQQREQQQQQQQQRQQ
QQQQQQQQQQPQQQPEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPP
PPPPPPPPQQQQQHQHQPFKNSNDEQESTRVSAGTEKAASQLRKAEQDGA
RGGGGTKVHTAL
back to top
Synonyms
Publications